Conservation of cofitness between MCAODC_00680 and MCAODC_08675 in Escherichia coli ECRC101

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_00680 skp molecular chaperone Skp 1.0 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD 0.78 3
Escherichia coli ECOR27 1.00 NOLOHH_02510 skp molecular chaperone Skp 1.00 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD low > 75
Escherichia coli ECRC100 1.00 OKFHMN_10165 skp molecular chaperone Skp 1.00 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD low > 80
Escherichia coli ECRC102 1.00 NIAGMN_08015 skp molecular chaperone Skp 1.00 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECOR38 1.00 HEPCGN_08120 skp molecular chaperone Skp 1.00 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC99 1.00 KEDOAH_17990 skp molecular chaperone Skp 1.00 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC62 1.00 BNILDI_09160 skp molecular chaperone Skp 1.00 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.68 11
Escherichia coli ECRC98 1.00 JDDGAC_13760 skp molecular chaperone Skp 1.00 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli BW25113 1.00 b0178 hlpA periplasmic chaperone (NCBI) 1.00 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) low > 76
Escherichia fergusonii Becca 1.00 EFB2_03866 Chaperone protein Skp 1.00 EFB2_00661 ATP-dependent RNA helicase DeaD low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00970 molecular chaperone Skp 1.00 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03485 Chaperone protein Skp 1.00 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD — —
Escherichia coli BL21 1.00 ECD_00176 periplasmic chaperone 1.00 ECD_03029 ATP-dependent RNA helicase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF44 Outer membrane protein H precursor 0.89 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05260 chaperone 0.86 BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase — —
Enterobacter sp. TBS_079 0.85 MPMX20_00862 Chaperone protein Skp 0.85 MPMX20_04066 ATP-dependent RNA helicase DeaD — —
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3766 Outer membrane protein 0.84 EX28DRAFT_3211 Superfamily II DNA and RNA helicases — —
Dickeya dadantii 3937 0.62 DDA3937_RS05160 molecular chaperone Skp 0.80 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase low > 74
Dickeya dianthicola ME23 0.62 DZA65_RS05500 molecular chaperone Skp 0.78 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase — —
Pantoea sp. MT58 0.62 IAI47_15485 molecular chaperone Skp 0.78 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase low > 76
Dickeya dianthicola 67-19 0.62 HGI48_RS05160 molecular chaperone Skp 0.78 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase — —
Rahnella sp. WP5 0.60 EX31_RS12990 molecular chaperone Skp 0.80 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase — —
Serratia liquefaciens MT49 0.57 IAI46_20215 molecular chaperone Skp 0.80 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase low > 86
Erwinia tracheiphila SCR3 0.54 LU632_RS19920 skp molecular chaperone Skp 0.78 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS16290 molecular chaperone Skp 0.78 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase low > 75
Alteromonas macleodii MIT1002 0.30 MIT1002_01013 Cationic 19 kDa outer membrane protein 0.45 MIT1002_00666 Cold-shock DEAD box protein A — —
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_11465 chaperone protein Skp 0.37 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase — —
Shewanella sp. ANA-3 0.25 Shewana3_2806 outer membrane chaperone Skp (OmpH) (RefSeq) 0.43 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO1638 ompH outer membrane protein OmpH (NCBI ptt file) 0.42 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.25 Sama_1148 outer membrane protein OmpH (RefSeq) 0.45 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) — —
Shewanella loihica PV-4 0.24 Shew_2626 outer membrane chaperone Skp (OmpH) (RefSeq) 0.46 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_1089 periplasmic chaperone for outer membrane proteins Skp 0.44 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) — —

Not shown: 1 genomes with orthologs for MCAODC_00680 only; 34 genomes with orthologs for MCAODC_08675 only