Conservation of cofitness between MCAODC_00680 and MCAODC_01315 in Escherichia coli ECRC101

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_00680 skp molecular chaperone Skp 1.0 MCAODC_01315 rapA RNA polymerase-associated protein RapA 0.76 5
Escherichia coli ECRC102 1.00 NIAGMN_08015 skp molecular chaperone Skp 1.00 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECOR27 1.00 NOLOHH_02510 skp molecular chaperone Skp 1.00 NOLOHH_03145 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECRC99 1.00 KEDOAH_17990 skp molecular chaperone Skp 1.00 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC98 1.00 JDDGAC_13760 skp molecular chaperone Skp 1.00 JDDGAC_14395 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC62 1.00 BNILDI_09160 skp molecular chaperone Skp 1.00 BNILDI_08460 rapA RNA polymerase-associated protein RapA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_08120 skp molecular chaperone Skp 1.00 HEPCGN_08790 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC100 1.00 OKFHMN_10165 skp molecular chaperone Skp 1.00 OKFHMN_10800 rapA RNA polymerase-associated protein RapA 0.94 3
Escherichia coli BL21 1.00 ECD_00176 periplasmic chaperone 1.00 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase low > 61
Escherichia coli BW25113 1.00 b0178 hlpA periplasmic chaperone (NCBI) 1.00 b0059 hepA ATP-dependent helicase HepA (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00970 molecular chaperone Skp 1.00 ECOLIN_RS00315 RNA polymerase-associated protein RapA — —
Escherichia fergusonii Becca 1.00 EFB2_03866 Chaperone protein Skp 1.00 EFB2_03986 RNA polymerase-associated protein RapA 0.46 14
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03485 Chaperone protein Skp 1.00 OHPLBJKB_03599 RNA polymerase-associated protein RapA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF44 Outer membrane protein H precursor 0.94 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05260 chaperone 0.92 BWI76_RS04570 RNA polymerase-associated protein RapA low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_00862 Chaperone protein Skp 0.92 MPMX20_00753 RNA polymerase-associated protein RapA — —
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3766 Outer membrane protein 0.92 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family — —
Dickeya dadantii 3937 0.62 DDA3937_RS05160 molecular chaperone Skp 0.79 DDA3937_RS18235 RNA polymerase-associated protein RapA low > 74
Dickeya dianthicola ME23 0.62 DZA65_RS05500 molecular chaperone Skp 0.78 DZA65_RS19310 RNA polymerase-associated protein RapA low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS05160 molecular chaperone Skp 0.78 HGI48_RS18170 RNA polymerase-associated protein RapA — —
Pantoea sp. MT58 0.62 IAI47_15485 molecular chaperone Skp 0.84 IAI47_16055 RNA polymerase-associated protein RapA low > 76
Rahnella sp. WP5 0.60 EX31_RS12990 molecular chaperone Skp 0.80 EX31_RS03745 RNA polymerase-associated protein RapA — —
Serratia liquefaciens MT49 0.57 IAI46_20215 molecular chaperone Skp 0.84 IAI46_03275 RNA polymerase-associated protein RapA low > 86
Erwinia tracheiphila SCR3 0.54 LU632_RS19920 skp molecular chaperone Skp 0.83 LU632_RS02805 rapA RNA polymerase-associated protein RapA — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS16290 molecular chaperone Skp 0.78 HER17_RS02990 RNA polymerase-associated protein RapA low > 75
Alteromonas macleodii MIT1002 0.30 MIT1002_01013 Cationic 19 kDa outer membrane protein 0.44 MIT1002_00659 RNA polymerase-associated protein RapA — —
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_11465 chaperone protein Skp 0.65 CSW01_12705 RNA polymerase-associated protein RapA — —
Shewanella sp. ANA-3 0.25 Shewana3_2806 outer membrane chaperone Skp (OmpH) (RefSeq) 0.60 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO1638 ompH outer membrane protein OmpH (NCBI ptt file) 0.59 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.25 Sama_1148 outer membrane protein OmpH (RefSeq) 0.60 Sama_3131 ATP-dependent helicase HepA (RefSeq) — —
Shewanella loihica PV-4 0.24 Shew_2626 outer membrane chaperone Skp (OmpH) (RefSeq) 0.59 Shew_0457 ATP-dependent helicase HepA (RefSeq) — —

Not shown: 2 genomes with orthologs for MCAODC_00680 only; 20 genomes with orthologs for MCAODC_01315 only