Conservation of cofitness between JDDGAC_23235 and JDDGAC_21550 in Escherichia coli ECRC98

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_23235 idi isopentenyl-diphosphate Delta-isomerase 1.0 JDDGAC_21550 rapZ RNase adapter RapZ 0.81 16
Escherichia coli ECRC102 1.00 NIAGMN_17360 idi isopentenyl-diphosphate Delta-isomerase 1.00 NIAGMN_15685 rapZ RNase adapter RapZ — —
Escherichia coli ECRC99 1.00 KEDOAH_08545 idi isopentenyl-diphosphate Delta-isomerase 1.00 KEDOAH_10225 rapZ RNase adapter RapZ — —
Escherichia coli ECRC100 1.00 OKFHMN_19595 idi isopentenyl-diphosphate Delta-isomerase 1.00 OKFHMN_17925 rapZ RNase adapter RapZ low > 80
Escherichia coli ECOR27 1.00 NOLOHH_11520 idi isopentenyl-diphosphate Delta-isomerase 1.00 NOLOHH_09725 rapZ RNase adapter RapZ low > 75
Escherichia coli ECRC101 1.00 MCAODC_10115 idi isopentenyl-diphosphate Delta-isomerase 1.00 MCAODC_08445 rapZ RNase adapter RapZ low > 87
Escherichia coli BL21 0.99 ECD_02721 isopentenyl diphosphate isomerase 1.00 ECD_03070 adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase low > 61
Escherichia coli ECRC62 0.98 BNILDI_10050 idi isopentenyl-diphosphate Delta-isomerase 1.00 BNILDI_01810 rapZ RNase adapter RapZ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_00826 Isopentenyl-diphosphate Delta-isomerase 1.00 OHPLBJKB_00495 RNase adapter protein RapZ low > 73
Escherichia coli BW25113 0.96 b2889 idi isopentenyl-diphosphate delta-isomerase (NCBI) 1.00 b3205 yhbJ hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.95 ECOLIN_RS16100 isopentenyl-diphosphate Delta-isomerase 1.00 ECOLIN_RS18440 RNase adapter RapZ low > 55
Escherichia fergusonii Becca 0.95 EFB2_01012 Isopentenyl-diphosphate Delta-isomerase 1.00 EFB2_00618 RNase adapter protein RapZ low > 86
Escherichia coli ECOR38 0.94 HEPCGN_18885 idi isopentenyl-diphosphate Delta-isomerase 1.00 HEPCGN_16800 rapZ RNase adapter RapZ low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2986 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.99 GFF2949 Hypothetical ATP-binding protein UPF0042, contains P-loop low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS23790 isopentenyl-diphosphate Delta-isomerase 0.97 BWI76_RS25280 RNase adaptor protein RapZ — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2940 isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 0.98 EX28DRAFT_3259 Predicted P-loop-containing kinase low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_03748 Isopentenyl-diphosphate Delta-isomerase 0.99 MPMX20_04111 RNase adapter protein RapZ low > 85
Rahnella sp. WP5 0.51 EX31_RS02215 isopentenyl-diphosphate Delta-isomerase 0.95 EX31_RS12385 RNase adapter RapZ low > 89
Mycobacterium tuberculosis H37Rv 0.36 Rv1745c Probable isopentenyl-diphosphate delta-isomerase Idi (IPP isomerase) (isopentenyl pyrophosphate isomerase) 0.34 Rv1421 Conserved protein low > 58
Rhodanobacter denitrificans MT42 0.28 LRK55_RS08325 isopentenyl-diphosphate Delta-isomerase 0.45 LRK55_RS12560 RNase adapter RapZ low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS08560 isopentenyl-diphosphate Delta-isomerase 0.45 LRK54_RS12860 RNase adapter RapZ low > 59
Pectobacterium carotovorum WPP14 0.25 HER17_RS13245 isopentenyl-diphosphate Delta-isomerase 0.96 HER17_RS20075 RNase adapter RapZ low > 75
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_19625 isopentenyl-diphosphate delta-isomerase 0.48 AO353_05195 glmZ(sRNA)-inactivating NTPase low > 101
Pantoea sp. MT58 0.23 IAI47_13340 isopentenyl-diphosphate Delta-isomerase 0.96 IAI47_17200 RNase adapter RapZ low > 76
Serratia liquefaciens MT49 0.23 IAI46_11275 isopentenyl-diphosphate Delta-isomerase 0.95 IAI46_22485 RNase adapter RapZ low > 86
Dinoroseobacter shibae DFL-12 0.23 Dshi_3527 isopentenyl-diphosphate delta-isomerase, type 1 (RefSeq) 0.34 Dshi_0209 hypothetical protein (RefSeq) — —

Not shown: 1 genomes with orthologs for JDDGAC_23235 only; 57 genomes with orthologs for JDDGAC_21550 only