Conservation of cofitness between JDDGAC_06150 and JDDGAC_09885 in Escherichia coli ECRC98

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA 1.0 JDDGAC_09885 ybiI C4-type zinc finger protein YbiI 0.58 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA 0.96 OHPLBJKB_02910 putative protein YbiI low > 73
Escherichia coli ECRC102 1.00 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA 0.98 NIAGMN_04295 ybiI C4-type zinc finger protein YbiI — —
Escherichia coli ECRC62 1.00 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA 0.96 BNILDI_20880 ybiI C4-type zinc finger protein YbiI low > 75
Escherichia coli BW25113 1.00 b1206 ychM orf, hypothetical protein (VIMSS) 0.96 b0803 ybiI hypothetical protein (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA 0.98 KEDOAH_21660 ybiI C4-type zinc finger protein YbiI — —
Escherichia coli BL21 1.00 ECD_01181 C4-dicarboxylic acid transporter 0.96 ECD_00770 DksA-type zinc finger protein — —
Escherichia coli ECRC101 1.00 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA 0.97 MCAODC_25465 ybiI C4-type zinc finger protein YbiI low > 87
Escherichia coli ECRC100 1.00 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA 0.98 OKFHMN_06250 ybiI C4-type zinc finger protein YbiI low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA 0.98 ECOLIN_RS04275 C4-type zinc finger protein YbiI — —
Escherichia coli ECOR27 1.00 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA 0.96 NOLOHH_22600 ybiI C4-type zinc finger protein YbiI low > 75
Escherichia fergusonii Becca 1.00 EFB2_02721 C4-dicarboxylic acid transporter DauA 0.98 EFB2_03302 putative protein YbiI low > 86
Escherichia coli ECOR38 1.00 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA 0.98 HEPCGN_01790 ybiI C4-type zinc finger protein YbiI low > 87
Klebsiella michiganensis M5al 0.92 BWI76_RS17465 C4-dicarboxylic acid transporter DauA 0.70 BWI76_RS08935 hypothetical protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2781 Putative sulfate permease 0.81 GFF701 Hypothetical Zinc-finger containing protein low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_02641 C4-dicarboxylic acid transporter DauA 0.85 MPMX20_01434 putative protein YbiI low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0825 high affinity sulphate transporter 1 0.84 EX28DRAFT_2185 transcriptional regulator, TraR/DksA family low > 76
Serratia liquefaciens MT49 0.70 IAI46_10305 C4-dicarboxylic acid transporter DauA 0.59 IAI46_07540 DksA/TraR family C4-type zinc finger protein low > 86
Rahnella sp. WP5 0.69 EX31_RS07290 C4-dicarboxylic acid transporter DauA 0.56 EX31_RS18970 DksA/TraR family C4-type zinc finger protein low > 89
Dickeya dadantii 3937 0.66 DDA3937_RS12220 C4-dicarboxylic acid transporter DauA 0.63 DDA3937_RS15160 DksA/TraR family C4-type zinc finger protein low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS12750 C4-dicarboxylic acid transporter DauA 0.64 DZA65_RS16060 DksA/TraR family C4-type zinc finger protein low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS12310 C4-dicarboxylic acid transporter DauA 0.63 HGI48_RS15235 DksA/TraR family C4-type zinc finger protein low > 71
Marinobacter adhaerens HP15 0.52 HP15_3240 sulfate permease family protein 0.61 HP15_1431 zinc finger, C4 DksA/TraR-type low > 73
Pseudomonas stutzeri RCH2 0.43 Psest_3240 Sulfate permease and related transporters (MFS superfamily) 0.67 Psest_0553 DnaK suppressor protein — —
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_1575 sulfate transporter (RefSeq) 0.64 DvMF_0832 hypothetical protein (RefSeq) low > 51
Pantoea sp. MT58 0.15 IAI47_21130 SulP family inorganic anion transporter 0.59 IAI47_09670 DksA/TraR family C4-type zinc finger protein low > 76
Pseudomonas sp. S08-1 0.14 OH686_05645 Sulfate permease 0.74 OH686_07755 Uncharacterized zinc-finger containing protein YbiI low > 80
Bosea sp. OAE506 0.14 ABIE41_RS20915 SulP family inorganic anion transporter 0.52 ABIE41_RS16485 DksA/TraR family C4-type zinc finger protein 0.36 2
Phaeobacter inhibens DSM 17395 0.13 PGA1_c06390 putative sulfate transporter 0.52 PGA1_c07465 putative dksA/traR C4-type zinc finger protein low > 62
Kangiella aquimarina DSM 16071 0.13 B158DRAFT_2337 Sulfate permease and related transporters (MFS superfamily) 0.54 B158DRAFT_1362 transcriptional regulator, TraR/DksA family low > 40
Xanthomonas campestris pv. campestris strain 8004 0.13 Xcc-8004.821.1 Sulfate permease 0.59 Xcc-8004.3640.1 Hypothetical Zinc-finger containing protein low > 74

Not shown: 58 genomes with orthologs for JDDGAC_06150 only; 4 genomes with orthologs for JDDGAC_09885 only