Conservation of cofitness between JDDGAC_01490 and JDDGAC_06245 in Escherichia coli ECRC98

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_01490 astD succinylglutamate-semialdehyde dehydrogenase 1.0 JDDGAC_06245 umuC DNA polymerase V catalytic protein 0.59 15
Escherichia coli ECRC100 1.00 OKFHMN_26915 astD succinylglutamate-semialdehyde dehydrogenase 1.00 OKFHMN_28265 umuC DNA polymerase V catalytic protein low > 80
Escherichia coli ECRC101 1.00 MCAODC_18495 astD succinylglutamate-semialdehyde dehydrogenase 1.00 MCAODC_21905 umuC DNA polymerase V catalytic protein low > 87
Escherichia coli ECRC102 1.00 NIAGMN_01150 astD succinylglutamate-semialdehyde dehydrogenase 1.00 NIAGMN_27955 umuC DNA polymerase V catalytic protein — —
Escherichia coli ECRC99 1.00 KEDOAH_01195 astD succinylglutamate-semialdehyde dehydrogenase 1.00 KEDOAH_25280 umuC DNA polymerase V catalytic protein — —
Escherichia coli ECRC62 0.98 BNILDI_16215 astD succinylglutamate-semialdehyde dehydrogenase 0.99 BNILDI_18915 umuC DNA polymerase V catalytic protein low > 75
Escherichia coli ECOR27 0.97 NOLOHH_17430 astD succinylglutamate-semialdehyde dehydrogenase 0.99 NOLOHH_20750 umuC DNA polymerase V catalytic protein low > 75
Escherichia coli BW25113 0.97 b1746 astD succinylglutamic semialdehyde dehydrogenase (NCBI) 0.99 b1184 umuC DNA polymerase V subunit UmuC (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01986 N-succinylglutamate 5-semialdehyde dehydrogenase 0.99 OHPLBJKB_02505 Protein UmuC low > 73
Escherichia coli BL21 0.97 ECD_01715 succinylglutamic semialdehyde dehydrogenase 0.99 ECD_01159 translesion error-prone DNA polymerase V subunit; DNA polymerase activity — —
Escherichia coli ECOR38 0.96 HEPCGN_05280 astD succinylglutamate-semialdehyde dehydrogenase 1.00 HEPCGN_24725 umuC DNA polymerase V catalytic protein low > 87
Escherichia fergusonii Becca 0.96 EFB2_02247 N-succinylglutamate 5-semialdehyde dehydrogenase 0.98 EFB2_02748 Protein UmuC low > 86
Escherichia coli Nissle 1917 0.96 ECOLIN_RS09735 succinylglutamate-semialdehyde dehydrogenase 0.98 ECOLIN_RS07160 DNA polymerase V catalytic protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF3494 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.85 GFF3989 Error-prone, lesion bypass DNA polymerase V (UmuC) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_1750 succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.86 EX28DRAFT_1261 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_01867 N-succinylglutamate 5-semialdehyde dehydrogenase 0.66 MPMX20_02045 Protein UmuC low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS11680 succinylglutamate-semialdehyde dehydrogenase 0.87 BWI76_RS12385 DNA polymerase V subunit UmuC low > 92
Rahnella sp. WP5 0.67 EX31_RS17400 succinylglutamate-semialdehyde dehydrogenase 0.68 EX31_RS00805 translesion error-prone DNA polymerase V subunit UmuC low > 89
Pantoea sp. MT58 0.67 IAI47_11085 succinylglutamate-semialdehyde dehydrogenase 0.64 IAI47_10585 translesion error-prone DNA polymerase V subunit UmuC low > 76
Serratia liquefaciens MT49 0.65 IAI46_15325 succinylglutamate-semialdehyde dehydrogenase 0.64 IAI46_15980 translesion error-prone DNA polymerase V subunit UmuC low > 86
Shewanella oneidensis MR-1 0.58 SO0619 astD Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) 0.35 SOA0012 umuC umuC protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_0612 astD succinylglutamic semialdehyde dehydrogenase (RefSeq) 0.36 Shewana3_1832 DNA-repair protein (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_3562 succinylglutamic semialdehyde dehydrogenase 0.45 Psyr_1425 DNA-directed DNA polymerase low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_3562 succinylglutamic semialdehyde dehydrogenase 0.45 Psyr_1425 DNA-directed DNA polymerase low > 86
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_3444 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.36 Pf1N1B4_5450 Error-prone, lesion bypass DNA polymerase V (UmuC) — —
Pseudomonas sp. RS175 0.56 PFR28_03280 N-succinylglutamate 5-semialdehyde dehydrogenase 0.45 PFR28_01192 Protein UmuC low > 88
Pseudomonas sp. S08-1 0.53 OH686_21305 succinylglutamate-semialdehyde dehydrogenase 0.39 OH686_22885 Error-prone, lesion bypass DNA polymerase V (UmuC) low > 80
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2219 succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.37 B158DRAFT_1835 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 40
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_1495 succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.34 Ga0059261_3541 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 68

Not shown: 21 genomes with orthologs for JDDGAC_01490 only; 9 genomes with orthologs for JDDGAC_06245 only