Conservation of cofitness between JDDGAC_10395 and JDDGAC_05210 in Escherichia coli ECRC98

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_10395 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.0 JDDGAC_05210 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.70 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02959 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.98 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF low > 73
Escherichia coli BW25113 1.00 b0754 aroG 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) 0.98 b1262 trpC N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) 0.20 30
Escherichia coli ECRC101 1.00 MCAODC_25960 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 MCAODC_15600 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 87
Escherichia coli ECRC99 1.00 KEDOAH_21225 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 KEDOAH_26085 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC100 1.00 OKFHMN_06740 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 OKFHMN_02665 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 80
Escherichia coli ECOR27 1.00 NOLOHH_23170 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.98 NOLOHH_20325 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD low > 75
Escherichia coli ECRC102 1.00 NIAGMN_04790 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 1.00 NIAGMN_26835 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli BL21 1.00 ECD_00707 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible 0.98 ECD_01236 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase low > 61
Escherichia coli ECRC62 0.99 BNILDI_21165 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.98 BNILDI_18470 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD low > 75
Escherichia coli ECOR38 0.99 HEPCGN_01535 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.96 HEPCGN_25525 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04015 3-deoxy-7-phosphoheptulonate synthase AroG 0.97 ECOLIN_RS07605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia fergusonii Becca 0.99 EFB2_03352 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.97 EFB2_02664 Tryptophan biosynthesis protein TrpCF 0.43 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF8 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.89 GFF2724 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2241 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.85 EX28DRAFT_0934 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 76
Klebsiella michiganensis M5al 0.95 BWI76_RS08600 3-deoxy-7-phosphoheptulonate synthase 0.84 BWI76_RS11850 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase low > 92
Enterobacter sp. TBS_079 0.94 MPMX20_01381 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive 0.84 MPMX20_02512 Tryptophan biosynthesis protein TrpCF low > 85
Rahnella sp. WP5 0.91 EX31_RS23545 3-deoxy-7-phosphoheptulonate synthase AroG 0.76 EX31_RS09970 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 89
Serratia liquefaciens MT49 0.91 IAI46_06405 3-deoxy-7-phosphoheptulonate synthase AroG 0.74 IAI46_14035 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 86
Dickeya dadantii 3937 0.90 DDA3937_RS06560 3-deoxy-7-phosphoheptulonate synthase AroG 0.68 DDA3937_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 74
Dickeya dianthicola ME23 0.89 DZA65_RS06960 3-deoxy-7-phosphoheptulonate synthase AroG 0.67 DZA65_RS10950 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 75
Pectobacterium carotovorum WPP14 0.89 HER17_RS14805 3-deoxy-7-phosphoheptulonate synthase AroG 0.67 HER17_RS10930 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 75
Dickeya dianthicola 67-19 0.89 HGI48_RS06605 3-deoxy-7-phosphoheptulonate synthase AroG 0.67 HGI48_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 71
Pantoea sp. MT58 0.89 IAI47_13605 3-deoxy-7-phosphoheptulonate synthase AroG 0.78 IAI47_09175 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 76
Erwinia tracheiphila SCR3 0.87 LU632_RS15925 aroG 3-deoxy-7-phosphoheptulonate synthase AroG 0.73 LU632_RS12765 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 74
Shewanella sp. ANA-3 0.77 Shewana3_3528 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.40 Shewana3_1517 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 73
Shewanella loihica PV-4 0.77 Shew_0851 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.45 Shew_2254 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) 0.59 11
Shewanella oneidensis MR-1 0.76 SO0756 aroG phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) 0.39 SO3022 trpC/F indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_19270 3-deoxy-7-phosphoheptulonate synthase 0.60 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase low > 62
Shewanella amazonensis SB2B 0.72 Sama_0657 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.45 Sama_2132 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 62

Not shown: 26 genomes with orthologs for JDDGAC_10395 only; 2 genomes with orthologs for JDDGAC_05210 only