Conservation of cofitness between IAI46_14550 and IAI46_07975 in Serratia liquefaciens MT49

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_14550 ATP-dependent DNA helicase 1.0 IAI46_07975 uridine kinase 0.58 1
Rahnella sp. WP5 0.86 EX31_RS10615 ATP-dependent DNA helicase 0.91 EX31_RS11545 uridine kinase low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS11290 ATP-dependent DNA helicase 0.90 HER17_RS14650 uridine kinase low > 75
Escherichia coli Nissle 1917 0.83 ECOLIN_RS10055 ATP-dependent DNA helicase 0.90 ECOLIN_RS12160 uridine kinase — —
Escherichia coli BL21 0.83 ECD_01778 putative ATP-dependent helicase, DinG family 0.90 ECD_01972 uridine/cytidine kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_01925 putative ATP-dependent helicase DinG 0.90 OHPLBJKB_01640 Uridine kinase 0.51 33
Escherichia coli ECRC98 0.83 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA 0.90 JDDGAC_28380 udk uridine kinase — —
Escherichia coli ECRC99 0.83 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA 0.90 KEDOAH_03880 udk uridine kinase — —
Escherichia coli ECRC101 0.83 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA 0.90 MCAODC_20670 udk uridine kinase — —
Escherichia coli ECRC101 0.83 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA 0.90 OKFHMN_24270 udk uridine kinase — —
Escherichia coli ECOR38 0.83 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA 0.90 HEPCGN_02970 udk uridine kinase low > 85
Escherichia coli ECOR27 0.83 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA 0.90 NOLOHH_15610 udk uridine kinase low > 57
Escherichia coli ECRC102 0.83 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA 0.90 NIAGMN_22215 udk uridine kinase — —
Escherichia coli ECRC62 0.83 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA 0.90 BNILDI_14520 udk uridine kinase — —
Escherichia fergusonii Becca 0.83 EFB2_02192 putative ATP-dependent DNA helicase YoaA 0.90 EFB2_01788 Uridine kinase low > 86
Pantoea sp. MT58 0.83 IAI47_08820 ATP-dependent DNA helicase 0.91 IAI47_06905 uridine kinase low > 76
Dickeya dadantii 3937 0.83 DDA3937_RS11240 ATP-dependent DNA helicase 0.91 DDA3937_RS06690 uridine kinase low > 74
Escherichia coli BW25113 0.83 b1808 yoaA conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.90 b2066 udk uridine/cytidine kinase (VIMSS) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2823 DinG family ATP-dependent helicase YoaA 0.92 GFF3861 Uridine kinase (EC 2.7.1.48) [C1] low > 78
Dickeya dianthicola 67-19 0.82 HGI48_RS11275 ATP-dependent DNA helicase 0.91 HGI48_RS06705 uridine kinase low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS11620 ATP-dependent DNA helicase 0.91 DZA65_RS07060 uridine kinase low > 75
Erwinia tracheiphila SCR3 0.81 LU632_RS13150 ATP-dependent DNA helicase 0.88 LU632_RS08740 udk uridine kinase low > 74
Enterobacter sp. TBS_079 0.81 MPMX20_02714 putative ATP-dependent DNA helicase YoaA 0.92 MPMX20_03048 Uridine kinase low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0750 Rad3-related DNA helicases 0.92 EX28DRAFT_0488 uridine kinase (EC 2.7.1.48) low > 76
Klebsiella michiganensis M5al 0.81 BWI76_RS17815 ATP-dependent helicase 0.91 BWI76_RS19125 uridine kinase — —
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_09930 ATP-dependent DNA helicase 0.74 CSW01_05280 uridine kinase 0.59 16
Alteromonas macleodii MIT1002 0.53 MIT1002_02593 putative ATP-dependent helicase DinG 0.49 MIT1002_03498 Uridine kinase low > 70
Shewanella oneidensis MR-1 0.44 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) 0.71 SO2617 udk uridine kinase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_1859 helicase c2 (RefSeq) 0.71 Shewana3_1762 uridine kinase (RefSeq) — —
Shewanella loihica PV-4 0.42 Shew_2196 helicase c2 (RefSeq) 0.71 Shew_1575 uridine kinase (RefSeq) 0.35 38
Shewanella amazonensis SB2B 0.40 Sama_1940 ATP-dependent helicase DinG (RefSeq) 0.72 Sama_2047 uridine kinase (RefSeq) low > 62

Not shown: 26 genomes with orthologs for IAI46_14550 only; 10 genomes with orthologs for IAI46_07975 only