Conservation of cofitness between IAI46_20390 and IAI46_06085 in Serratia liquefaciens MT49

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_20390 N-acetylmuramoyl-L-alanine amidase 1.0 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase 0.47 16
Pectobacterium carotovorum WPP14 0.79 HER17_RS16500 N-acetylmuramoyl-L-alanine amidase AmiC 0.83 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1298 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.77 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) low > 78
Escherichia coli ECOR38 0.76 HEPCGN_19320 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.78 HEPCGN_01065 nagA N-acetylglucosamine-6-phosphate deacetylase 0.83 5
Escherichia coli BW25113 0.76 b2817 b2817 putative amidase (VIMSS) 0.79 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) low > 76
Escherichia coli ECOR27 0.76 NOLOHH_11950 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 NOLOHH_23545 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00913 N-acetylmuramoyl-L-alanine amidase AmiC 0.78 OHPLBJKB_03038 N-acetylglucosamine-6-phosphate deacetylase low > 73
Escherichia coli ECRC100 0.76 OKFHMN_20065 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 OKFHMN_07165 nagA N-acetylglucosamine-6-phosphate deacetylase low > 80
Escherichia coli ECRC101 0.76 MCAODC_10590 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 MCAODC_26380 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECRC102 0.76 NIAGMN_17835 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 NIAGMN_05220 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia fergusonii Becca 0.76 EFB2_01067 N-acetylmuramoyl-L-alanine amidase AmiC 0.78 EFB2_03426 N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli ECRC62 0.76 BNILDI_10430 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli ECRC99 0.76 KEDOAH_08065 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 KEDOAH_20805 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECRC98 0.76 JDDGAC_23730 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.79 JDDGAC_10815 nagA N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli Nissle 1917 0.76 ECOLIN_RS15815 N-acetylmuramoyl-L-alanine amidase AmiC 0.78 ECOLIN_RS03615 N-acetylglucosamine-6-phosphate deacetylase low > 55
Escherichia coli BL21 0.76 ECD_02665 N-acetylmuramoyl-L-alanine amidase 0.78 ECD_00634 N-acetylglucosamine-6-phosphate deacetylase low > 61
Dickeya dianthicola 67-19 0.76 HGI48_RS05005 N-acetylmuramoyl-L-alanine amidase 0.78 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS05345 N-acetylmuramoyl-L-alanine amidase 0.77 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase low > 75
Dickeya dadantii 3937 0.75 DDA3937_RS04995 N-acetylmuramoyl-L-alanine amidase 0.78 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase low > 74
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2892 N-acetylmuramoyl-L-alanine amidase 0.78 EX28DRAFT_2298 N-acetylglucosamine-6-phosphate deacetylase low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_03680 N-acetylmuramoyl-L-alanine amidase AmiC 0.78 MPMX20_01323 N-acetylglucosamine-6-phosphate deacetylase low > 85
Pantoea sp. MT58 0.74 IAI47_03980 N-acetylmuramoyl-L-alanine amidase 0.79 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Klebsiella michiganensis M5al 0.72 BWI76_RS23215 N-acetylmuramoyl-L-alanine amidase 0.78 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Erwinia tracheiphila SCR3 0.68 LU632_RS06215 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.77 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase low > 74
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS04210 N-acetylmuramoyl-L-alanine amidase 0.18 HSERO_RS22760 N-acetylglucosamine-6-phosphate deacetylase — —
Pseudomonas sp. RS175 0.33 PFR28_05118 N-acetylmuramoyl-L-alanine amidase AmiC 0.16 PFR28_03512 N-acetylgalactosamine-6-phosphate deacetylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_08670 N-acetylmuramoyl-L-alanine amidase 0.17 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_10120 N-acetylmuramoyl-L-alanine amidase 0.18 AO353_04450 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_157 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.18 PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 87
Pseudomonas fluorescens SBW25 0.31 PFLU_RS02555 AMIN domain-containing protein 0.18 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS02555 AMIN domain-containing protein 0.18 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase low > 109
Pseudomonas simiae WCS417 0.31 PS417_02475 N-acetylmuramoyl-L-alanine amidase 0.18 PS417_22985 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 88
Rhizobium sp. OAE497 0.19 ABIE40_RS07550 N-acetylmuramoyl-L-alanine amidase 0.29 ABIE40_RS18570 N-acetylglucosamine-6-phosphate deacetylase — —
Phaeobacter inhibens DSM 17395 0.17 PGA1_c20290 putative N-acetylmuramoyl-L-alanine amidase AmiC 0.30 PGA1_c27880 N-acetylglucosamine-6-phosphate deacetylase NagA — —
Agrobacterium fabrum C58 0.16 Atu1340 N-acetylmuramoyl-L-alanine amidase 0.27 Atu2608 N-acetylglucosamine-6-phosphate deacetylase — —
Synechococcus elongatus PCC 7942 0.13 Synpcc7942_2360 amiA N-acetylmuramoyl-L-alanine amidase 0.23 Synpcc7942_0440 nagA N-acetylglucosamine 6-phosphate deacetylase — —

Not shown: 15 genomes with orthologs for IAI46_20390 only; 34 genomes with orthologs for IAI46_06085 only