Conservation of cofitness between IAI46_17350 and IAI46_03070 in Serratia liquefaciens MT49

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_17350 DEAD/DEAH box helicase family protein 1.0 IAI46_03070 acetate uptake transporter 0.52 14
Rahnella sp. WP5 0.84 EX31_RS19200 DEAD/DEAH box helicase 0.77 EX31_RS03905 acetate uptake transporter low > 89
Pectobacterium carotovorum WPP14 0.83 HER17_RS12960 DEAD/DEAH box helicase family protein 0.78 HER17_RS02835 acetate uptake transporter low > 75
Pantoea sp. MT58 0.83 IAI47_06580 DEAD/DEAH box helicase 0.62 IAI47_16180 acetate uptake transporter low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS19815 ATP-dependent helicase 0.68 BWI76_RS04285 hypothetical protein low > 92
Escherichia coli ECOR27 0.82 NOLOHH_14930 radD Putative DNA repair helicase RadD 0.72 NOLOHH_03400 satP acetate uptake transporter low > 57
Escherichia coli ECRC98 0.82 JDDGAC_27315 radD Putative DNA repair helicase RadD 0.72 JDDGAC_14665 satP acetate uptake transporter — —
Escherichia coli ECRC102 0.82 NIAGMN_21120 radD Putative DNA repair helicase RadD 0.72 NIAGMN_08920 satP acetate uptake transporter — —
Escherichia coli ECRC99 0.82 KEDOAH_04830 radD Putative DNA repair helicase RadD 0.72 KEDOAH_17085 satP acetate uptake transporter — —
Escherichia coli ECRC101 0.82 OKFHMN_23355 radD Putative DNA repair helicase RadD 0.72 OKFHMN_11070 satP acetate uptake transporter — —
Escherichia coli ECRC101 0.82 MCAODC_14405 radD Putative DNA repair helicase RadD 0.72 MCAODC_01585 satP acetate uptake transporter — —
Escherichia coli ECRC62 0.82 BNILDI_13850 radD Putative DNA repair helicase RadD 0.72 BNILDI_08205 satP acetate uptake transporter — —
Escherichia coli ECOR38 0.82 HEPCGN_22620 radD Putative DNA repair helicase RadD 0.72 HEPCGN_09070 satP acetate uptake transporter low > 85
Escherichia coli BW25113 0.82 b2184 yejH DNA damage response helicase (yejH or radD) (from data) 0.72 b0010 yaaH conserved inner membrane protein associated with acetate transport (NCBI) low > 76
Escherichia coli BL21 0.82 ECD_02114 putative ATP-dependent DNA or RNA helicase 0.72 ECD_00010 succinate-acetate transporter low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_01525 Putative DNA repair helicase RadD 0.72 OHPLBJKB_03650 Succinate-acetate/proton symporter SatP low > 73
Escherichia coli Nissle 1917 0.82 ECOLIN_RS12765 DEAD/DEAH box helicase 0.72 ECOLIN_RS00060 acetate uptake transporter low > 52
Escherichia fergusonii Becca 0.82 EFB2_01672 Putative DNA repair helicase RadD 0.72 EFB2_04033 Succinate-acetate/proton symporter SatP low > 86
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0377 DNA or RNA helicases of superfamily II 0.70 EX28DRAFT_3623 Predicted membrane protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF3752 ATP-dependent RNA helicase YejH 0.73 GFF1085 YaaH protein low > 78
Dickeya dadantii 3937 0.81 DDA3937_RS09150 DEAD/DEAH box helicase 0.79 DDA3937_RS18375 acetate uptake transporter low > 74
Enterobacter sp. TBS_079 0.81 MPMX20_03150 Putative DNA repair helicase RadD 0.70 MPMX20_00719 Succinate-acetate/proton symporter SatP low > 85
Dickeya dianthicola 67-19 0.79 HGI48_RS09190 DEAD/DEAH box helicase 0.79 HGI48_RS18310 acetate uptake transporter low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS09490 DEAD/DEAH box helicase 0.78 DZA65_RS19450 acetate uptake transporter low > 75
Erwinia tracheiphila SCR3 0.78 LU632_RS17600 DEAD/DEAH box helicase 0.78 LU632_RS02650 satP acetate uptake transporter low > 74
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_08225 ATP-dependent helicase 0.60 CSW01_03995 hypothetical protein low > 62
Shewanella sp. ANA-3 0.52 Shewana3_2524 type III restriction enzyme, res subunit (RefSeq) 0.59 Shewana3_3180 GPR1/FUN34/yaaH family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.52 SO2744 DNA damage response helicase (yejH or radD) (from data) 0.59 SO3588 gpr1/fun34/yaaH family protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.51 Shew_1532 type III restriction enzyme, res subunit (RefSeq) 0.61 Shew_0904 GPR1/FUN34/yaaH family protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_2080 DNA damage response helicase (yejH or radD) (from data) 0.57 Sama_0695 gpr1/fun34/YaaH family protein (RefSeq) low > 62

Not shown: 1 genomes with orthologs for IAI46_17350 only; 7 genomes with orthologs for IAI46_03070 only