Conservation of cofitness between HSERO_RS16875 and HSERO_RS22760 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16875 diguanylate cyclase 1.0 HSERO_RS22760 N-acetylglucosamine-6-phosphate deacetylase 0.26 18
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS14650 diguanylate cyclase 0.63 QEN71_RS01585 N-acetylglucosamine-6-phosphate deacetylase — —
Serratia liquefaciens MT49 0.40 IAI46_05890 diguanylate cyclase 0.18 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase low > 86
Pseudomonas simiae WCS417 0.39 PS417_21835 histidine kinase 0.60 PS417_22985 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS23435 diguanylate cyclase 0.60 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase low > 109
Pseudomonas fluorescens SBW25 0.39 PFLU_RS23435 diguanylate cyclase 0.60 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase low > 109
Dickeya dadantii 3937 0.36 DDA3937_RS06830 diguanylate cyclase 0.17 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase low > 74
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_21315 histidine kinase 0.60 AO353_04450 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_01080 histidine kinase 0.57 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 104
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4282 Protein YaiC 0.18 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) low > 78
Pectobacterium carotovorum WPP14 0.33 HER17_RS14460 diguanylate cyclase AdrA 0.18 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_03289 putative diguanylate cyclase DgcC 0.27 OHPLBJKB_00566 N-acetylgalactosamine-6-phosphate deacetylase low > 73
Escherichia coli BL21 0.31 ECD_00332 diguanylate cyclase, cellulose regualtor 0.27 ECD_03002 N-acetylgalactosamine-6-phosphate deacetylase low > 61
Escherichia coli Nissle 1917 0.31 ECOLIN_RS02340 diguanylate cyclase AdrA 0.28 ECOLIN_RS18050 N-acetylglucosamine-6-phosphate deacetylase low > 55
Escherichia coli ECRC101 0.31 MCAODC_27840 adrA diguanylate cyclase AdrA 0.28 MCAODC_08820 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECOR38 0.31 HEPCGN_07255 adrA diguanylate cyclase AdrA 0.28 HEPCGN_17145 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Escherichia coli ECRC102 0.31 NIAGMN_06670 adrA diguanylate cyclase AdrA 0.28 NIAGMN_16070 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECRC98 0.31 JDDGAC_12270 adrA diguanylate cyclase AdrA 0.28 JDDGAC_21940 nagA N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia fergusonii Becca 0.31 EFB2_03671 putative diguanylate cyclase DgcC 0.28 EFB2_00684 N-acetylgalactosamine-6-phosphate deacetylase low > 86
Escherichia coli ECRC100 0.31 OKFHMN_08615 adrA diguanylate cyclase AdrA 0.28 OKFHMN_18310 nagA N-acetylglucosamine-6-phosphate deacetylase low > 80
Escherichia coli BW25113 0.31 b0385 yaiC predicted diguanylate cyclase (NCBI) 0.18 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) low > 76
Escherichia coli ECRC99 0.31 KEDOAH_19350 adrA diguanylate cyclase AdrA 0.28 KEDOAH_09840 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECOR27 0.31 NOLOHH_01540 adrA diguanylate cyclase AdrA 0.28 NOLOHH_10090 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia coli ECRC62 0.31 BNILDI_22955 adrA diguanylate cyclase AdrA 0.18 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS19325 diguanylate cyclase 0.22 ABZR86_RS16045 N-acetylglucosamine-6-phosphate deacetylase low > 74
Enterobacter sp. TBS_079 0.28 MPMX20_00975 putative diguanylate cyclase DgcC 0.28 MPMX20_04044 N-acetylgalactosamine-6-phosphate deacetylase low > 85
Pantoea sp. MT58 0.27 IAI47_19665 diguanylate cyclase 0.19 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Enterobacter asburiae PDN3 0.26 EX28DRAFT_2586 diguanylate cyclase (GGDEF) domain 0.28 EX28DRAFT_3191 N-acetylglucosamine-6-phosphate deacetylase low > 76
Klebsiella michiganensis M5al 0.25 BWI76_RS21800 MASE2 domain/diguanylate cyclase 0.17 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Rahnella sp. WP5 0.23 EX31_RS22990 diguanylate cyclase 0.19 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase low > 89

Not shown: 9 genomes with orthologs for HSERO_RS16875 only; 40 genomes with orthologs for HSERO_RS22760 only