Conservation of cofitness between HSERO_RS12675 and HSERO_RS07660 in Herbaspirillum seropedicae SmR1

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS12675 AraC family transcriptional regulator 1.0 HSERO_RS07660 RND transporter 0.38 5
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.50 PFLU_RS13440 efflux transporter outer membrane subunit low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS10275 GlxA family transcriptional regulator 0.50 PFLU_RS13440 efflux transporter outer membrane subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_6090 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.45 Pf6N2E2_1270 Heavy metal RND efflux outer membrane protein, CzcC family low > 103
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04312 transcriptional regulator, AraC family with amidase-like domain 0.50 H281DRAFT_02344 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family low > 103
Pseudomonas simiae WCS417 0.45 PS417_09670 AraC family transcriptional regulator 0.49 PS417_12755 RND transporter low > 88
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2369 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.47 PfGW456L13_3264 Heavy metal RND efflux outer membrane protein, CzcC family low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_19580 AraC family transcriptional regulator 0.45 AO353_22905 RND transporter low > 101
Pseudomonas sp. RS175 0.44 PFR28_02891 HTH-type transcriptional regulator CdhR 0.46 PFR28_02192 Cation efflux system protein CusC low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_21045 AraC family transcriptional regulator 0.45 AO356_25885 RND transporter low > 104
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS04350 helix-turn-helix domain-containing protein 0.47 QEN71_RS29570 efflux transporter outer membrane subunit low > 153
Pseudomonas sp. S08-1 0.41 OH686_23095 Transcriptional regulator, AraC family 0.46 OH686_00935 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system low > 80
Variovorax sp. OAS795 0.38 ABID97_RS26935 GlxA family transcriptional regulator 0.34 ABID97_RS20845 efflux transporter outer membrane subunit low > 91
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS28635 AraC family transcriptional regulator 0.49 RR42_RS03300 RND transporter low > 128
Pseudomonas stutzeri RCH2 0.33 Psest_0752 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.48 Psest_2141 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family low > 67
Ralstonia solanacearum UW163 0.30 UW163_RS16650 AraC family transcriptional regulator 0.47 UW163_RS21020 RND transporter
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS23400 AraC family transcriptional regulator 0.47 RALBFv3_RS18110 RND transporter low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.51 Psyr_2485 RND efflux system, outer membrane lipoprotein, NodT low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2740 transcriptional regulator, AraC family with amidase-like domain protein 0.51 Psyr_2485 RND efflux system, outer membrane lipoprotein, NodT low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF2648 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.25 GFF489 RND efflux system, outer membrane lipoprotein, NodT family low > 90

Not shown: 29 genomes with orthologs for HSERO_RS12675 only; 10 genomes with orthologs for HSERO_RS07660 only