Conservation of cofitness between HSERO_RS03975 and HSERO_RS07340 in Herbaspirillum seropedicae SmR1

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03975 flagellar biosynthesis protein FliP 1.0 HSERO_RS07340 LysR family transcriptional regulator 0.18 20
Pseudomonas fluorescens SBW25 0.50 PFLU_RS03550 EscR/YscR/HrcR family type III secretion system export apparatus protein 0.39 PFLU_RS07335 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS03550 EscR/YscR/HrcR family type III secretion system export apparatus protein 0.39 PFLU_RS07335 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.49 PS417_03490 type III secretion system protein SsaR 0.38 PS417_07220 LysR family transcriptional regulator low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1208 type III secretion protein HrcR 0.38 Psyr_3165 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1208 type III secretion protein HrcR 0.38 Psyr_3165 transcriptional regulator, LysR family low > 86
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3734.1 Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components) 0.19 Xcc-8004.1048.1 Transcriptional regulator lysR family low > 74
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS13755 type III secretion system export apparatus subunit SctR 0.31 ABZR86_RS17035 LysR family transcriptional regulator low > 74
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_05010 type III secretion protein R 0.35 H281DRAFT_03335 transcriptional regulator, LysR family low > 103
Ralstonia solanacearum UW163 0.41 UW163_RS19600 EscR/YscR/HrcR family type III secretion system export apparatus protein 0.23 UW163_RS08525 LysR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS19575 EscR/YscR/HrcR family type III secretion system export apparatus protein 0.23 RALBFv3_RS05100 LysR family transcriptional regulator low > 76
Paraburkholderia graminis OAS925 0.40 ABIE53_006037 type III secretion protein R 0.37 ABIE53_005445 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS36835 type III secretion system export apparatus subunit SctR 0.35 QEN71_RS11315 LysR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS25895 type III secretion system protein 0.40 BPHYT_RS27430 LysR family transcriptional regulator — —
Escherichia coli ECRC101 0.37 MCAODC_05800 escR Type III secretion systemminor export apparatus protein EscR 0.35 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD low > 87
Escherichia coli ECRC102 0.37 NIAGMN_13050 escR Type III secretion systemminor export apparatus protein EscR 0.35 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD — —
Escherichia coli ECRC99 0.37 KEDOAH_12855 escR Type III secretion systemminor export apparatus protein EscR 0.35 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD — —
Escherichia coli ECRC98 0.37 JDDGAC_18915 escR Type III secretion systemminor export apparatus protein EscR 0.35 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD low > 86
Escherichia coli ECRC100 0.37 OKFHMN_15290 escR Type III secretion systemminor export apparatus protein EscR 0.36 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS19255 type III secretion system export apparatus subunit SctR 0.37 ABZR87_RS08345 LysR family transcriptional regulator low > 80

Not shown: 11 genomes with orthologs for HSERO_RS03975 only; 25 genomes with orthologs for HSERO_RS07340 only