Conservation of cofitness between HSERO_RS18645 and HSERO_RS06815 in Herbaspirillum seropedicae SmR1

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS18645 chemotaxis protein CheY 1.0 HSERO_RS06815 multidrug transporter 0.28 20
Ralstonia solanacearum PSI07 0.46 RPSI07_RS05625 two-component system response regulator 0.84 RPSI07_RS03390 multidrug efflux RND transporter permease subunit low > 81
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_02781 Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains 0.63 H281DRAFT_04170 multidrug efflux pump low > 103
Paraburkholderia graminis OAS925 0.39 ABIE53_006006 adenylate cyclase 0.62 ABIE53_003408 multidrug efflux pump low > 113
Pseudomonas putida KT2440 0.32 PP_2942 Response regulator 0.63 PP_1385 Probable efflux pump membrane transporter TtgB low > 96
Pseudomonas simiae WCS417 0.32 PS417_05440 chemotaxis protein CheY 0.62 PS417_06770 multidrug transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS05525 response regulator 0.60 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS05525 response regulator 0.60 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5467 Response regulator 0.62 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB low > 103
Pseudomonas sp. RS175 0.31 PFR28_03482 Sensor histidine kinase RcsC 0.63 PFR28_00631 putative efflux pump membrane transporter TtgB low > 88
Pseudomonas sp. S08-1 0.31 OH686_08945 hypothetical protein 0.64 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) low > 80
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_17715 chemotaxis protein CheY 0.62 AO356_04880 multidrug transporter low > 104
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_788 Response regulator 0.63 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_16190 chemotaxis protein CheY 0.63 AO353_17295 multidrug transporter low > 101
Shewanella oneidensis MR-1 0.28 SO2541 response regulator (NCBI ptt file) 0.64 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.25 MIT1002_03637 Hydrogenase transcriptional regulatory protein hupR1 0.57 MIT1002_00135 Multidrug-efflux transporter MexB low > 70
Rhodospirillum rubrum S1H 0.13 Rru_A0692 Response regulator receiver domain protein (CheY) (NCBI) 0.61 Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) low > 58
Dickeya dianthicola 67-19 0.12 HGI48_RS10210 response regulator 0.62 HGI48_RS05790 multidrug efflux RND transporter permease subunit low > 71
Dickeya dianthicola ME23 0.12 DZA65_RS10630 response regulator 0.62 DZA65_RS06115 multidrug efflux RND transporter permease subunit low > 75
Dickeya dadantii 3937 0.12 DDA3937_RS10180 response regulator 0.63 DDA3937_RS05735 multidrug efflux RND transporter permease subunit low > 74

Not shown: 6 genomes with orthologs for HSERO_RS18645 only; 47 genomes with orthologs for HSERO_RS06815 only