Conservation of cofitness between HGI48_RS17360 and HGI48_RS20595 in Dickeya dianthicola 67-19

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS17360 YggU family protein 1.0 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.49 9
Dickeya dianthicola ME23 1.00 DZA65_RS18450 YggU family protein 1.00 DZA65_RS21610 envelope stress response regulator transcription factor CpxR low > 75
Dickeya dadantii 3937 0.97 DDA3937_RS17315 YggU family protein 0.98 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR — —
Pectobacterium carotovorum WPP14 0.86 HER17_RS03795 DUF167 family protein YggU 0.93 HER17_RS00665 envelope stress response regulator transcription factor CpxR low > 75
Enterobacter sp. TBS_079 0.86 MPMX20_03811 hypothetical protein 0.84 MPMX20_04556 Transcriptional regulatory protein CpxR low > 85
Serratia liquefaciens MT49 0.85 IAI46_21425 YggU family protein 0.81 IAI46_24660 envelope stress response regulator transcription factor CpxR low > 86
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2991 TIGR00251 family protein 0.84 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS24110 YggU family protein 0.84 BWI76_RS00720 DNA-binding response regulator low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3056 COG1872 0.84 GFF2280 Copper-sensing two-component system response regulator CpxR low > 78
Escherichia coli ECRC98 0.82 JDDGAC_22875 yggU DUF167 domain-containing protein 0.83 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR low > 86
Escherichia coli ECRC102 0.82 NIAGMN_17010 yggU DUF167 domain-containing protein 0.83 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC101 0.82 MCAODC_09765 yggU DUF167 domain-containing protein 0.83 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR low > 87
Escherichia coli ECRC100 0.82 OKFHMN_19245 yggU DUF167 domain-containing protein 0.83 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR low > 80
Escherichia coli ECRC99 0.82 KEDOAH_08895 yggU DUF167 domain-containing protein 0.83 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECOR38 0.81 HEPCGN_18550 yggU DUF167 domain-containing protein 0.83 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR low > 87
Escherichia coli ECRC62 0.81 BNILDI_09695 yggU DUF167 domain-containing protein 0.83 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli BL21 0.81 ECD_02783 UPF0235 family protein 0.83 ECD_03798 response regulator in two-component regulatory system with CpxA low > 61
Escherichia coli ECOR27 0.81 NOLOHH_11115 yggU DUF167 domain-containing protein 0.83 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia fergusonii Becca 0.81 EFB2_00949 hypothetical protein 0.83 EFB2_04705 Transcriptional regulatory protein CpxR low > 86
Escherichia coli Nissle 1917 0.81 ECOLIN_RS16425 DUF167 family protein YggU 0.84 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00763 hypothetical protein 0.83 OHPLBJKB_04138 Transcriptional regulatory protein CpxR low > 73
Escherichia coli BW25113 0.81 b2953 yggU orf, hypothetical protein (VIMSS) 0.83 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) low > 76
Shewanella loihica PV-4 0.76 Shew_1134 hypothetical protein (RefSeq) 0.54 Shew_3570 two component transcriptional regulator (RefSeq) low > 60
Rahnella sp. WP5 0.74 EX31_RS02700 YggU family protein 0.87 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.22 42
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_02440 YggU family protein 0.58 CSW01_13590 DNA-binding response regulator low > 62
Shewanella sp. ANA-3 0.68 Shewana3_1191 hypothetical protein (RefSeq) 0.48 Shewana3_0253 two component transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO3356 conserved hypothetical protein TIGR00251 (NCBI ptt file) 0.48 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.67 Sama_2480 hypothetical protein (RefSeq) 0.53 Sama_3432 response regulator receiver protein (RefSeq) low > 62
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2339 COG1872 0.39 Pf1N1B4_3547 DNA-binding response regulator low > 87
Pseudomonas sp. S08-1 0.39 OH686_10990 hypothetical protein 0.40 OH686_20775 Two-component transcriptional response regulator, LuxR family low > 80

Not shown: 9 genomes with orthologs for HGI48_RS17360 only; 5 genomes with orthologs for HGI48_RS20595 only