Conservation of cofitness between HGI48_RS06620 and HGI48_RS18230 in Dickeya dianthicola 67-19

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS06620 galactose-1-epimerase 1.0 HGI48_RS18230 threonine/serine exporter ThrE family protein 0.64 16
Dickeya dianthicola ME23 0.98 DZA65_RS06975 galactose-1-epimerase 1.00 DZA65_RS19370 threonine/serine exporter ThrE family protein low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS06600 galactose-1-epimerase 0.99 DDA3937_RS18295 threonine/serine exporter ThrE family protein low > 74
Pectobacterium carotovorum WPP14 0.67 HER17_RS14770 galactose-1-epimerase 0.88 HER17_RS02920 threonine/serine exporter ThrE family protein low > 75
Serratia liquefaciens MT49 0.63 IAI46_06420 galactose-1-epimerase 0.79 IAI46_03215 threonine/serine exporter ThrE family protein low > 86
Rahnella sp. WP5 0.58 EX31_RS23565 galactose-1-epimerase 0.80 EX31_RS03805 threonine/serine exporter ThrE family protein 0.35 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF649 Aldose 1-epimerase (EC 5.1.3.3) 0.75 GFF1023 FIG023911: putative membrane protein low > 78
Escherichia coli ECRC62 0.57 BNILDI_21155 galM galactose-1-epimerase 0.75 BNILDI_07940 yjjP putative succinate transporter subunit YjjP low > 75
Escherichia coli ECOR27 0.57 NOLOHH_23160 galM galactose-1-epimerase 0.75 NOLOHH_03660 yjjP putative succinate transporter subunit YjjP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02957 Aldose 1-epimerase 0.75 OHPLBJKB_03699 Inner membrane protein YjjP low > 73
Escherichia coli ECOR38 0.57 HEPCGN_01545 galM galactose-1-epimerase 0.75 HEPCGN_09350 yjjP putative succinate transporter subunit YjjP low > 87
Escherichia coli BW25113 0.57 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) 0.75 b4364 yjjP putative structural protein (VIMSS) low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04025 galactose-1-epimerase 0.75 ECOLIN_RS25045 threonine/serine exporter ThrE family protein low > 55
Escherichia fergusonii Becca 0.57 EFB2_03350 Aldose 1-epimerase 0.75 EFB2_04084 Inner membrane protein YjjP low > 86
Escherichia coli ECRC101 0.57 MCAODC_25950 galM galactose-1-epimerase 0.74 MCAODC_01845 yjjP putative succinate transporter subunit YjjP low > 87
Escherichia coli ECRC98 0.57 JDDGAC_10385 galM galactose-1-epimerase 0.74 JDDGAC_14925 yjjP putative succinate transporter subunit YjjP low > 86
Escherichia coli ECRC102 0.57 NIAGMN_04780 galM galactose-1-epimerase 0.74 NIAGMN_09180 yjjP putative succinate transporter subunit YjjP — —
Escherichia coli ECRC100 0.57 OKFHMN_06730 galM galactose-1-epimerase 0.74 OKFHMN_11330 yjjP putative succinate transporter subunit YjjP low > 80
Escherichia coli ECRC99 0.57 KEDOAH_21235 galM galactose-1-epimerase 0.74 KEDOAH_16815 yjjP putative succinate transporter subunit YjjP — —
Klebsiella michiganensis M5al 0.56 BWI76_RS08610 galactose-1-epimerase 0.76 BWI76_RS04015 membrane protein low > 92
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2239 galactose mutarotase 0.76 EX28DRAFT_3567 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01383 Aldose 1-epimerase 0.76 MPMX20_00657 Inner membrane protein YjjP low > 85
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_07995 galactose-1-epimerase 0.51 CSW01_02300 hypothetical protein low > 62
Shewanella oneidensis MR-1 0.28 SO0693 galM aldose 1-epimerase (NCBI ptt file) 0.44 SO3648 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.28 Shewana3_3579 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.43 Shewana3_3216 hypothetical protein (RefSeq) low > 73
Bacteroides ovatus ATCC 8483 0.28 BACOVA_03348 aldose 1-epimerase 0.16 BACOVA_00781 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3529 aldose 1-epimerase precursor (NCBI ptt file) 0.17 BT0975 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.25 Sama_0535 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.45 Sama_2826 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.24 Shew_3272 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.43 Shew_0872 hypothetical protein (RefSeq) — —
Fusobacterium nucleatum SB010 0.21 HUW76_01285 galactose mutarotase 0.10 HUW76_04740 threonine/serine exporter ThrE family protein low > 35

Not shown: 42 genomes with orthologs for HGI48_RS06620 only; 3 genomes with orthologs for HGI48_RS18230 only