Conservation of cofitness between HGI48_RS14460 and HGI48_RS04345 in Dickeya dianthicola 67-19

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein 1.0 HGI48_RS04345 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.54 2
Dickeya dianthicola ME23 1.00 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein 1.00 DZA65_RS04265 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Dickeya dadantii 3937 0.96 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.98 DDA3937_RS04355 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF1560 Tricarboxylate transport protein TctC 0.86 GFF2198 NADP-dependent malic enzyme (EC 1.1.1.40) low > 78
Enterobacter sp. TBS_079 0.78 MPMX20_03193 hypothetical protein 0.85 MPMX20_03324 NADP-dependent malic enzyme low > 85
Serratia liquefaciens MT49 0.77 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein 0.89 IAI46_18585 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Klebsiella michiganensis M5al 0.76 BWI76_RS20035 hypothetical protein 0.86 BWI76_RS20830 bifunctional malic enzyme oxidoreductase/phosphotransacetylase low > 92
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3029 Tricarboxylate transport protein TctC 0.60 GFF3306 NADP-dependent malic enzyme (EC 1.1.1.40) low > 90
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS03285 tricarboxylic transport membrane protein 0.62 RR42_RS05210 malic enzyme low > 128
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS22660 tricarboxylate transporter 0.63 HSERO_RS16825 NADP-dependent malic enzyme oxidoreductase low > 78
Acidovorax sp. GW101-3H11 0.45 Ac3H11_112 Tricarboxylate transport protein TctC 0.60 Ac3H11_1079 NADP-dependent malic enzyme (EC 1.1.1.40) low > 79
Variovorax sp. SCN45 0.44 GFF2606 Tripartite tricarboxylate transporter TctC family 0.61 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) low > 127
Variovorax sp. OAS795 0.42 ABID97_RS19745 tripartite tricarboxylate transporter substrate-binding protein 0.62 ABID97_RS22340 NADP-dependent malic enzyme — —
Azospirillum brasilense Sp245 0.21 AZOBR_RS31445 C4-dicarboxylate ABC transporter substrate-binding protein 0.57 AZOBR_RS21145 NADP-dependent malic enzyme low > 97
Sinorhizobium meliloti 1021 0.18 SM_b20724 hypothetical protein 0.55 SMc00169 malic enzyme low > 103
Rhizobium sp. OAE497 0.18 ABIE40_RS16420 tripartite tricarboxylate transporter substrate binding protein 0.54 ABIE40_RS10450 NADP-dependent malic enzyme low > 107
Bosea sp. OAE506 0.16 ABIE41_RS20950 tripartite tricarboxylate transporter substrate binding protein 0.52 ABIE41_RS21715 NADP-dependent malic enzyme low > 77
Azospirillum sp. SherDot2 0.16 MPMX19_03915 hypothetical protein 0.60 MPMX19_04254 NADP-dependent malic enzyme low > 112
Phaeobacter inhibens DSM 17395 0.16 PGA1_c07940 Uncharacterized protein conserved in bacteria 0.53 PGA1_c11910 Malate dehydrogenase (decarboxylating) (EC 1.1.1.39) (from data) low > 62
Dinoroseobacter shibae DFL-12 0.15 Dshi_3123 Tricarboxylate transport protein TctC (from data) 0.52 Dshi_0826 malic protein NAD-binding (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.10 TX73_024390 tripartite tricarboxylate transporter substrate binding protein 0.51 TX73_015740 NADP-dependent malic enzyme low > 86

Not shown: 18 genomes with orthologs for HGI48_RS14460 only; 51 genomes with orthologs for HGI48_RS04345 only