Conservation of cofitness between HER17_RS12895 and HER17_RS20585 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12895 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 1.0 HER17_RS20585 Sec-independent protein translocase subunit TatC 0.72 20
Serratia liquefaciens MT49 0.80 IAI46_17305 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.90 IAI46_01090 Sec-independent protein translocase subunit TatC low > 86
Erwinia tracheiphila SCR3 0.75 LU632_RS17465 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC 0.84 23
Rahnella sp. WP5 0.74 EX31_RS19120 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 EX31_RS14600 Sec-independent protein translocase subunit TatC low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF3761 Lipoprotein spr precursor 0.81 GFF265 Twin-arginine translocation protein TatC 0.77 12
Dickeya dadantii 3937 0.72 DDA3937_RS09195 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.90 DDA3937_RS20305 Sec-independent protein translocase subunit TatC low > 74
Enterobacter sp. TBS_079 0.72 MPMX20_03141 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.82 MPMX20_04442 Sec-independent protein translocase protein TatC low > 85
Dickeya dianthicola ME23 0.72 DZA65_RS09540 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.90 DZA65_RS00980 Sec-independent protein translocase subunit TatC low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS09235 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.88 HGI48_RS00920 Sec-independent protein translocase subunit TatC low > 71
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0386 Cell wall-associated hydrolases (invasion-associated proteins) 0.83 EX28DRAFT_4503 Twin arginine targeting (Tat) protein translocase TatC low > 76
Escherichia fergusonii Becca 0.71 EFB2_01681 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.83 EFB2_04777 Sec-independent protein translocase protein TatC low > 86
Escherichia coli BL21 0.71 ECD_02105 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase 0.83 ECD_03731 TatABCE protein translocation system subunit low > 61
Escherichia coli ECOR38 0.71 HEPCGN_22665 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 HEPCGN_12905 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECRC99 0.71 KEDOAH_04785 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 KEDOAH_13875 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECOR27 0.71 NOLOHH_14975 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 NOLOHH_06405 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia coli ECRC102 0.71 NIAGMN_21165 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 NIAGMN_12030 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS12720 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC low > 55
Escherichia coli ECRC100 0.71 OKFHMN_23400 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 OKFHMN_14275 tatC Sec-independent protein translocase subunit TatC low > 80
Escherichia coli BW25113 0.71 b2175 spr predicted peptidase, outer membrane lipoprotein (NCBI) 0.83 b3839 tatC TatABCE protein translocation system subunit (NCBI) low > 76
Escherichia coli ECRC62 0.71 BNILDI_13895 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 BNILDI_05125 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia coli ECRC98 0.71 JDDGAC_27360 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 JDDGAC_17900 tatC Sec-independent protein translocase subunit TatC low > 86
Escherichia coli ECRC101 0.71 MCAODC_14450 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.83 MCAODC_04780 tatC Sec-independent protein translocase subunit TatC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01534 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.83 OHPLBJKB_04213 Sec-independent protein translocase protein TatC low > 73
Klebsiella michiganensis M5al 0.71 BWI76_RS19770 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.80 BWI76_RS01330 twin-arginine translocase subunit TatC low > 92
Pantoea sp. MT58 0.67 IAI47_06625 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.84 IAI47_18260 Sec-independent protein translocase subunit TatC — —
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_02660 peptidase P60 0.61 AO353_12345 twin-arginine protein translocation system subunit TatC low > 101
Pseudomonas sp. RS175 0.26 PFR28_03213 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.61 PFR28_04982 Sec-independent protein translocase protein TatC — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_19115 peptidase P60 0.61 AO356_09540 twin-arginine protein translocation system subunit TatC low > 104
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS19575 glycoside hydrolase 0.21 CA265_RS18375 twin-arginine translocase subunit TatC — —
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS18260 C40 family peptidase 0.22 ABI39_RS18845 twin-arginine translocase subunit TatC low > 72
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS05845 C40 family peptidase 0.23 HMPREF1058_RS05020 twin-arginine translocase subunit TatC low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_3684 NLP/P60 0.60 Psyr_0382 Sec-independent periplasmic protein translocase — —
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_3684 NLP/P60 0.60 Psyr_0382 Sec-independent periplasmic protein translocase — —
Pseudomonas sp. S08-1 0.23 OH686_05015 NLP/P60 family protein 0.62 OH686_10180 twin arginine-targeting protein translocase TatC — —

Not shown: 1 genomes with orthologs for HER17_RS12895 only; 61 genomes with orthologs for HER17_RS20585 only