Conservation of cofitness between HER17_RS20550 and HER17_RS20285 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20550 fatty acid oxidation complex subunit alpha FadB 1.0 HER17_RS20285 amino acid ABC transporter permease 0.61 12
Serratia liquefaciens MT49 0.78 IAI46_01130 fatty acid oxidation complex subunit alpha FadB 0.42 IAI46_15765 cystine ABC transporter permease low > 86
Escherichia coli ECOR27 0.75 NOLOHH_06375 fadB fatty acid oxidation complex subunit alpha FadB 0.46 NOLOHH_16420 tcyL cystine ABC transporter permease low > 75
Escherichia coli BW25113 0.75 b3846 fadB fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) 0.46 b1918 yecS predicted transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC99 0.75 KEDOAH_13905 fadB fatty acid oxidation complex subunit alpha FadB 0.46 KEDOAH_02290 tcyL cystine ABC transporter permease
Escherichia coli ECOR38 0.75 HEPCGN_12875 fadB fatty acid oxidation complex subunit alpha FadB 0.46 HEPCGN_04155 tcyL cystine ABC transporter permease low > 87
Escherichia coli ECRC101 0.75 MCAODC_04750 fadB fatty acid oxidation complex subunit alpha FadB 0.46 MCAODC_19590 tcyL cystine ABC transporter permease low > 87
Escherichia coli ECRC102 0.75 NIAGMN_12000 fadB fatty acid oxidation complex subunit alpha FadB 0.46 NIAGMN_02250 tcyL cystine ABC transporter permease
Escherichia coli ECRC98 0.75 JDDGAC_17870 fadB fatty acid oxidation complex subunit alpha FadB 0.46 JDDGAC_00390 tcyL cystine ABC transporter permease low > 86
Escherichia coli ECRC100 0.75 OKFHMN_14245 fadB fatty acid oxidation complex subunit alpha FadB 0.46 OKFHMN_25800 tcyL cystine ABC transporter permease low > 80
Enterobacter asburiae PDN3 0.74 EX28DRAFT_4510 fatty oxidation complex, alpha subunit FadB 0.47 EX28DRAFT_0629 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04207 Fatty acid oxidation complex subunit alpha 0.46 OHPLBJKB_01811 L-cystine transport system permease protein YecS low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF273 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.46 GFF1694 Cystine ABC transporter, permease protein low > 78
Enterobacter sp. TBS_079 0.73 MPMX20_04436 Fatty acid oxidation complex subunit alpha 0.47 MPMX20_02843 L-cystine transport system permease protein YecS low > 85
Escherichia coli ECRC62 0.73 BNILDI_05155 fadB fatty acid oxidation complex subunit alpha FadB 0.46 BNILDI_15210 tcyL cystine ABC transporter permease low > 75
Klebsiella michiganensis M5al 0.73 BWI76_RS01365 multifunctional fatty acid oxidation complex subunit alpha 0.47 BWI76_RS18355 amino acid ABC transporter permease low > 92
Escherichia fergusonii Becca 0.73 EFB2_04771 Fatty acid oxidation complex subunit alpha 0.46 EFB2_02028 L-cystine transport system permease protein YecS low > 86
Rahnella sp. WP5 0.73 EX31_RS14565 fatty acid oxidation complex subunit alpha FadB 0.47 EX31_RS09430 cystine ABC transporter permease low > 89
Dickeya dadantii 3937 0.72 DDA3937_RS20250 fatty acid oxidation complex subunit alpha FadB 0.89 DDA3937_RS01280 amino acid ABC transporter permease low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS00975 fatty acid oxidation complex subunit alpha FadB 0.89 HGI48_RS01260 amino acid ABC transporter permease low > 71
Pantoea sp. MT58 0.71 IAI47_18230 fatty acid oxidation complex subunit alpha FadB 0.48 IAI47_08180 cystine ABC transporter permease low > 76
Dickeya dianthicola ME23 0.71 DZA65_RS01035 fatty acid oxidation complex subunit alpha FadB 0.89 DZA65_RS01305 amino acid ABC transporter permease low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_3290 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase 0.45 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_3290 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase 0.45 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein low > 86
Pseudomonas fluorescens SBW25 0.53 PFLU_RS07650 fatty acid oxidation complex subunit alpha FadB 0.47 PFLU_RS01210 cystine ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.53 PS417_07575 multifunctional fatty acid oxidation complex subunit alpha 0.44 PS417_01100 amino acid ABC transporter permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS07650 fatty acid oxidation complex subunit alpha FadB 0.47 PFLU_RS01210 cystine ABC transporter permease low > 109
Pseudomonas sp. RS175 0.52 PFR28_01110 Fatty acid oxidation complex subunit alpha 0.44 PFR28_04854 L-cystine transport system permease protein YecS low > 88
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_2290 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.45 Pf6N2E2_3920 Cystine ABC transporter, permease protein
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3903 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.47 Pf1N1B4_1694 Cystine ABC transporter, permease protein
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4041 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 0.47 PfGW456L13_445 Cystine ABC transporter, permease protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_02330 multifunctional fatty acid oxidation complex subunit alpha 0.45 AO356_10240 amino acid ABC transporter permease
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_00510 multifunctional fatty acid oxidation complex subunit alpha 0.48 AO353_11670 amino acid ABC transporter permease low > 101
Pseudomonas putida KT2440 0.52 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.45 PP_0226 sulfur compound ABC transporter - permease subunit low > 96
Pseudomonas sp. S08-1 0.52 OH686_21925 fatty oxidation complex, alpha subunit FadB 0.44 OH686_18900 L-cystine ABC transporter (wide substrate range), permease protein YecS low > 80

Not shown: 19 genomes with orthologs for HER17_RS20550 only; 20 genomes with orthologs for HER17_RS20285 only