Conservation of cofitness between HER17_RS16590 and HER17_RS19985 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16590 DNA mismatch repair endonuclease MutH 1.0 HER17_RS19985 serine endoprotease DegQ 0.66 4
Dickeya dadantii 3937 0.82 DDA3937_RS04940 DNA mismatch repair endonuclease MutH 0.88 DDA3937_RS01605 serine endoprotease DegQ low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS05285 DNA mismatch repair endonuclease MutH 0.88 DZA65_RS01585 serine endoprotease DegQ low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS04950 DNA mismatch repair endonuclease MutH 0.88 HGI48_RS01520 serine endoprotease DegQ — —
Serratia liquefaciens MT49 0.77 IAI46_20460 DNA mismatch repair endonuclease MutH 0.84 IAI46_22390 serine endoprotease DegQ low > 86
Rahnella sp. WP5 0.77 EX31_RS13210 DNA mismatch repair endonuclease MutH 0.71 EX31_RS12475 Do family serine endopeptidase low > 89
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2906 DNA mismatch repair protein MutH 0.73 EX28DRAFT_3283 periplasmic serine protease, Do/DeqQ family low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_03694 DNA mismatch repair protein MutH 0.73 MPMX20_04138 Periplasmic pH-dependent serine endoprotease DegQ low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF1314 DNA mismatch repair endonuclease MutH 0.73 GFF2974 Outer membrane stress sensor protease DegQ, serine protease low > 78
Erwinia tracheiphila SCR3 0.73 LU632_RS06095 mutH DNA mismatch repair endonuclease MutH 0.68 LU632_RS21355 Do family serine endopeptidase low > 74
Escherichia coli ECOR38 0.73 HEPCGN_19245 mutH DNA mismatch repair endonuclease MutH 0.71 HEPCGN_16675 degQ serine endoprotease DegQ low > 87
Escherichia coli ECRC100 0.73 OKFHMN_19990 mutH DNA mismatch repair endonuclease MutH 0.71 OKFHMN_17805 degQ serine endoprotease DegQ low > 80
Escherichia coli ECRC99 0.73 KEDOAH_08140 mutH DNA mismatch repair endonuclease MutH 0.71 KEDOAH_10345 degQ serine endoprotease DegQ — —
Escherichia coli ECRC98 0.73 JDDGAC_23655 mutH DNA mismatch repair endonuclease MutH 0.71 JDDGAC_21430 degQ serine endoprotease DegQ low > 86
Escherichia coli ECRC101 0.73 MCAODC_10515 mutH DNA mismatch repair endonuclease MutH 0.71 MCAODC_08325 degQ serine endoprotease DegQ low > 87
Escherichia fergusonii Becca 0.73 EFB2_01052 DNA mismatch repair protein MutH 0.71 EFB2_00596 Periplasmic pH-dependent serine endoprotease DegQ low > 86
Escherichia coli ECOR27 0.73 NOLOHH_11875 mutH DNA mismatch repair endonuclease MutH 0.71 NOLOHH_09605 degQ serine endoprotease DegQ low > 75
Escherichia coli ECRC102 0.73 NIAGMN_17760 mutH DNA mismatch repair endonuclease MutH 0.71 NIAGMN_15565 degQ serine endoprotease DegQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00898 DNA mismatch repair protein MutH 0.71 OHPLBJKB_00470 Periplasmic pH-dependent serine endoprotease DegQ low > 73
Escherichia coli BL21 0.73 ECD_02679 methyl-directed mismatch repair protein 0.71 ECD_03094 serine endoprotease, periplasmic low > 61
Escherichia coli BW25113 0.73 b2831 mutH DNA mismatch repair protein (NCBI) 0.71 b3234 degQ serine endoprotease, periplasmic (NCBI) low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15895 DNA mismatch repair endonuclease MutH 0.71 ECOLIN_RS18545 serine endoprotease DegQ low > 55
Pantoea sp. MT58 0.73 IAI47_03910 DNA mismatch repair endonuclease MutH 0.74 IAI47_17260 serine endoprotease DegQ low > 76
Escherichia coli ECRC62 0.72 BNILDI_10355 mutH DNA mismatch repair endonuclease MutH 0.71 BNILDI_01930 degQ serine endoprotease DegQ low > 75
Klebsiella michiganensis M5al 0.72 BWI76_RS23290 DNA mismatch repair protein MutH 0.72 BWI76_RS25365 serine endoprotease DegQ low > 92
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_03515 DNA mismatch repair protein MutH 0.64 CSW01_03020 serine endoprotease DegQ low > 62
Shewanella loihica PV-4 0.62 Shew_1037 DNA mismatch repair protein (RefSeq) 0.59 Shew_3296 protease Do (RefSeq) low > 60
Shewanella sp. ANA-3 0.60 Shewana3_3044 DNA mismatch repair protein (RefSeq) 0.59 Shewana3_0690 peptidase Do (RefSeq) low > 73
Shewanella oneidensis MR-1 0.60 SO1330 mutH DNA mismatch repair protein MutH (NCBI ptt file) 0.59 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.56 Sama_0862 DNA mismatch repair protein (RefSeq) 0.59 Sama_3073 serine protease (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.56 MIT1002_00646 Methyl-directed mismatch repair protein 0.55 MIT1002_00842 Periplasmic pH-dependent serine endoprotease DegQ precursor low > 70
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0550 DNA mismatch repair protein MutH 0.29 B158DRAFT_2183 periplasmic serine protease, Do/DeqQ family low > 40

Not shown: 0 genomes with orthologs for HER17_RS16590 only; 31 genomes with orthologs for HER17_RS19985 only