Conservation of cofitness between HER17_RS11350 and HER17_RS19835 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11350 23S rRNA (guanine(745)-N(1))-methyltransferase 1.0 HER17_RS19835 glutathionylspermidine synthase family protein 0.72 10
Dickeya dadantii 3937 0.64 DDA3937_RS11305 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 DDA3937_RS01730 glutathionylspermidine synthase family protein low > 74
Dickeya dianthicola 67-19 0.64 HGI48_RS11340 23S rRNA (guanine(745)-N(1))-methyltransferase 0.81 HGI48_RS01625 glutathionylspermidine synthase family protein low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS11685 23S rRNA (guanine(745)-N(1))-methyltransferase 0.81 DZA65_RS01700 glutathionylspermidine synthase family protein low > 75
Serratia liquefaciens MT49 0.61 IAI46_14835 23S rRNA (guanine(745)-N(1))-methyltransferase 0.89 IAI46_21985 glutathionylspermidine synthase family protein low > 86
Rahnella sp. WP5 0.61 EX31_RS24675 23S rRNA (guanine(745)-N(1))-methyltransferase 0.85 EX31_RS08110 glutathionylspermidine synthase family protein low > 89
Enterobacter sp. TBS_079 0.60 MPMX20_02727 23S rRNA (guanine(745)-N(1))-methyltransferase 0.84 MPMX20_03884 Putative acid--amine ligase YgiC low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_0737 Methyltransferase domain 0.84 EX28DRAFT_3075 Glutathionylspermidine synthase low > 76
Klebsiella michiganensis M5al 0.58 BWI76_RS17920 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 BWI76_RS24410 putative glutathione-like synthetase low > 92
Escherichia coli BW25113 0.57 b1822 rrmA 23S rRNA m1G745 methyltransferase (NCBI) 0.82 b3038 ygiC predicted enzyme (NCBI) low > 76
Escherichia fergusonii Becca 0.57 EFB2_02178 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 EFB2_00771 Putative acid--amine ligase YgiC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_01908 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 OHPLBJKB_00666 Putative acid--amine ligase YgiC low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS10140 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 ECOLIN_RS17530 glutathionylspermidine synthase family protein — —
Escherichia coli ECRC62 0.57 BNILDI_15805 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 BNILDI_00915 ygiC Putative acid--amine ligase YgiC low > 75
Escherichia coli ECOR38 0.57 HEPCGN_04900 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 HEPCGN_17670 ygiC Putative acid--amine ligase YgiC low > 87
Escherichia coli BL21 0.57 ECD_01792 23S rRNA m(1)G745 methyltransferase, SAM-dependent 0.82 ECD_02910 ATP-Grasp family ATPase low > 61
Escherichia coli ECRC98 0.56 JDDGAC_01075 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 JDDGAC_22430 ygiC Putative acid--amine ligase YgiC 0.55 27
Escherichia coli ECRC102 0.56 NIAGMN_01560 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 NIAGMN_16560 ygiC Putative acid--amine ligase YgiC — —
Escherichia coli ECRC99 0.56 KEDOAH_01605 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 KEDOAH_09350 ygiC Putative acid--amine ligase YgiC — —
Escherichia coli ECRC101 0.56 MCAODC_18905 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 MCAODC_09310 ygiC Putative acid--amine ligase YgiC low > 87
Escherichia coli ECRC100 0.56 OKFHMN_26500 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 OKFHMN_18795 ygiC Putative acid--amine ligase YgiC low > 80
Escherichia coli ECOR27 0.56 NOLOHH_17025 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 NOLOHH_10600 ygiC Putative acid--amine ligase YgiC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2836 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.82 GFF3151 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 low > 78
Pantoea sp. MT58 0.53 IAI47_08750 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 IAI47_03125 glutathionylspermidine synthase family protein low > 76
Erwinia tracheiphila SCR3 0.52 LU632_RS13200 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.81 LU632_RS20645 glutathionylspermidine synthase family protein low > 74
Alteromonas macleodii MIT1002 0.33 MIT1002_01980 23S rRNA (guanine(745)-N(1))-methyltransferase 0.63 MIT1002_02822 Bifunctional glutathionylspermidine synthetase/amidase low > 70
Pseudomonas sp. S08-1 0.31 OH686_06565 23S rRNA (guanine(745)-N(1))-methyltransferase 0.42 OH686_03875 Similarity with glutathionylspermidine synthase , group 1 low > 80
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.47 Psyr_1698 Glutathionylspermidine synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_16405 SAM-dependent methyltransferase 0.48 AO353_06840 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.47 Psyr_1698 Glutathionylspermidine synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3070 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.48 Pf1N1B4_2615 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 low > 87
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3084 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.48 Pf6N2E2_4948 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_06095 SAM-dependent methyltransferase 0.49 AO356_15075 hypothetical protein low > 104

Not shown: 14 genomes with orthologs for HER17_RS11350 only; 16 genomes with orthologs for HER17_RS19835 only