Conservation of cofitness between HER17_RS14920 and HER17_RS18705 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14920 ADP-forming succinate--CoA ligase subunit beta 1.0 HER17_RS18705 altronate dehydratase family protein 0.56 19
Dickeya dadantii 3937 0.93 DDA3937_RS06470 ADP-forming succinate--CoA ligase subunit beta 0.91 DDA3937_RS02835 altronate dehydratase
Dickeya dianthicola ME23 0.92 DZA65_RS06855 ADP-forming succinate--CoA ligase subunit beta 0.91 DZA65_RS02980 altronate dehydratase low > 75
Dickeya dianthicola 67-19 0.92 HGI48_RS06510 ADP-forming succinate--CoA ligase subunit beta 0.90 HGI48_RS02810 altronate dehydratase 0.62 12
Serratia liquefaciens MT49 0.91 IAI46_06285 ADP-forming succinate--CoA ligase subunit beta 0.86 IAI46_22215 altronate dehydratase low > 86
Pantoea sp. MT58 0.91 IAI47_13735 ADP-forming succinate--CoA ligase subunit beta 0.83 IAI47_02920 altronate dehydratase
Klebsiella michiganensis M5al 0.90 BWI76_RS08425 succinyl-CoA ligase subunit beta 0.80 BWI76_RS24725 altronate hydrolase low > 92
Escherichia coli ECRC99 0.90 KEDOAH_21050 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 KEDOAH_09620 uxaA altronate dehydratase
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03880 ADP-forming succinate--CoA ligase subunit beta 0.81 ECOLIN_RS17825 altronate dehydratase
Escherichia coli ECRC98 0.90 JDDGAC_10570 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 JDDGAC_22160 uxaA altronate dehydratase low > 86
Escherichia coli BW25113 0.90 b0728 sucC succinyl-CoA synthetase subunit beta (NCBI) 0.81 b3091 uxaA altronate hydrolase (NCBI) low > 76
Escherichia coli ECRC62 0.90 BNILDI_21300 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 BNILDI_01190 uxaA altronate dehydratase low > 75
Escherichia coli ECRC101 0.90 MCAODC_26135 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 MCAODC_09040 uxaA altronate dehydratase low > 87
Escherichia coli ECRC102 0.90 NIAGMN_04965 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 NIAGMN_16290 uxaA altronate dehydratase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_02989 Succinate--CoA ligase [ADP-forming] subunit beta 0.81 OHPLBJKB_00611 Altronate dehydratase low > 73
Escherichia coli ECOR38 0.90 HEPCGN_01315 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 HEPCGN_17380 uxaA altronate dehydratase low > 87
Escherichia fergusonii Becca 0.90 EFB2_03378 Succinate--CoA ligase [ADP-forming] subunit beta 0.81 EFB2_00721 Altronate dehydratase low > 86
Escherichia coli ECRC100 0.90 OKFHMN_06915 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 OKFHMN_18525 uxaA altronate dehydratase low > 80
Escherichia coli BL21 0.90 ECD_00687 succinyl-CoA synthetase, beta subunit 0.81 ECD_02960 altronate hydrolase low > 61
Escherichia coli ECOR27 0.90 NOLOHH_23305 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 NOLOHH_10325 uxaA altronate dehydratase low > 75
Rahnella sp. WP5 0.89 EX31_RS23450 ADP-forming succinate--CoA ligase subunit beta 0.85 EX31_RS12685 altronate dehydratase low > 89
Enterobacter sp. TBS_079 0.88 MPMX20_01356 Succinate--CoA ligase [ADP-forming] subunit beta 0.82 MPMX20_04000 Altronate dehydratase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2264 succinyl-CoA synthetase, beta subunit 0.82 EX28DRAFT_3159 Altronate dehydratase low > 76
Alteromonas macleodii MIT1002 0.75 MIT1002_01950 Succinyl-CoA ligase [ADP-forming] subunit beta 0.47 MIT1002_02430 Altronate dehydratase
Azospirillum brasilense Sp245 0.55 AZOBR_RS14065 malate--CoA ligase subunit beta 0.51 AZOBR_RS16155 altronate hydrolase low > 97
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.48 CCNA_01555 altronate dehydratase
Caulobacter crescentus NA1000 0.54 CCNA_00340 succinyl-CoA synthetase beta chain 0.48 CCNA_01555 altronate dehydratase
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_2278 succinyl-CoA synthetase, beta subunit 0.43 Ga0059261_2974 Altronate dehydratase
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS14420 ADP-forming succinate--CoA ligase subunit beta 0.26 A4249_RS07735 altronate dehydratase family protein
Bacteroides thetaiotaomicron VPI-5482 0.44 BT0788 succinyl-CoA synthetase beta chain (NCBI ptt file) 0.59 BT0486 altronate hydrolase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.44 BACOVA_02527 succinate-CoA ligase, beta subunit 0.59 BACOVA_03832 SAF domain protein low > 94
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2908 succinyl-CoA synthetase, beta subunit 0.27 Echvi_3632 Altronate dehydratase low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS04300 succinate--CoA ligase subunit beta 0.25 CA265_RS19875 Altronate dehydratase (EC 4.2.1.7) (from data)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS07630 ADP-forming succinate--CoA ligase subunit beta 0.25 ABZR88_RS10490 UxaA family hydrolase

Not shown: 62 genomes with orthologs for HER17_RS14920 only; 4 genomes with orthologs for HER17_RS18705 only