Conservation of cofitness between HER17_RS02445 and HER17_RS15905 in Pectobacterium carotovorum WPP14

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02445 YjjG family noncanonical pyrimidine nucleotidase 1.0 HER17_RS15905 YajQ family cyclic di-GMP-binding protein 0.63 7
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_17260 noncanonical pyrimidine nucleotidase, YjjG family 0.60 CSW01_07570 nucleotide-binding protein low > 62
Erwinia tracheiphila SCR3 0.26 LU632_RS03765 yjjG pyrimidine 5'-nucleotidase 0.84 LU632_RS18450 YajQ family cyclic di-GMP-binding protein low > 74
Shewanella loihica PV-4 0.25 Shew_0363 nucleotidase (RefSeq) 0.58 Shew_2893 nucleotide-binding protein (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS00760 YjjG family noncanonical pyrimidine nucleotidase 0.43 ABZR88_RS04840 YajQ family cyclic di-GMP-binding protein low > 71
Escherichia coli ECRC99 0.25 KEDOAH_16860 yjjG pyrimidine 5'-nucleotidase 0.78 KEDOAH_19575 yajQ nucleotide binding protein YajQ — —
Escherichia coli BL21 0.25 ECD_04249 dUMP phosphatase 0.78 ECD_00374 phage Phi6 host factor, ATP/GTP binding protein low > 61
Escherichia coli ECRC102 0.25 NIAGMN_09135 yjjG pyrimidine 5'-nucleotidase 0.78 NIAGMN_06445 yajQ nucleotide binding protein YajQ — —
Escherichia coli ECRC100 0.25 OKFHMN_11285 yjjG pyrimidine 5'-nucleotidase 0.78 OKFHMN_08390 yajQ nucleotide binding protein YajQ — —
Escherichia coli ECOR38 0.25 HEPCGN_09290 yjjG pyrimidine 5'-nucleotidase 0.78 HEPCGN_07020 yajQ nucleotide binding protein YajQ low > 87
Escherichia fergusonii Becca 0.25 EFB2_04073 Pyrimidine 5'-nucleotidase YjjG 0.78 EFB2_03631 hypothetical protein low > 86
Shewanella oneidensis MR-1 0.25 SO0372 HAD-superfamily hydrolase, subfamily IA, variant 1 protein family (NCBI ptt file) 0.61 SO3815 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli ECRC101 0.25 MCAODC_01800 yjjG pyrimidine 5'-nucleotidase 0.78 MCAODC_27615 yajQ nucleotide binding protein YajQ low > 87
Escherichia coli ECRC98 0.25 JDDGAC_14880 yjjG pyrimidine 5'-nucleotidase 0.78 JDDGAC_12045 yajQ nucleotide binding protein YajQ low > 86
Escherichia coli BW25113 0.25 b4374 yjjG nucleotidase (NCBI) 0.78 b0426 yajQ orf, hypothetical protein (VIMSS) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF1034 '5'-nucleotidase YjjG (EC 3.1.3.5)' transl_table=11 0.77 GFF4337 FIG001943: hypothetical protein YajQ low > 78
Shewanella sp. ANA-3 0.24 Shewana3_3797 nucleotidase (RefSeq) 0.62 Shewana3_0782 putative nucleotide-binding protein (RefSeq) low > 73
Klebsiella michiganensis M5al 0.23 BWI76_RS04095 dUMP phosphatase 0.82 BWI76_RS06410 YajQ family cyclic di-GMP-binding protein low > 92
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3582 noncanonical pyrimidine nucleotidase, YjjG family 0.78 EX28DRAFT_2545 Uncharacterized protein conserved in bacteria low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS19470 noncanonical pyrimidine nucleotidase, YjjG family 0.37 CA265_RS09840 YajQ family cyclic di-GMP-binding protein low > 88
Escherichia coli ECOR27 0.23 NOLOHH_03605 yjjG pyrimidine 5'-nucleotidase 0.78 NOLOHH_01340 yajQ nucleotide binding protein YajQ low > 75
Escherichia coli Nissle 1917 0.23 ECOLIN_RS25105 pyrimidine 5'-nucleotidase 0.78 ECOLIN_RS02565 nucleotide binding protein YajQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03688 'Pyrimidine 5'-nucleotidase YjjG' transl_table=11 0.78 OHPLBJKB_03250 hypothetical protein low > 73
Escherichia coli ECRC62 0.23 BNILDI_07995 yjjG pyrimidine 5'-nucleotidase 0.78 BNILDI_22755 yajQ nucleotide binding protein YajQ low > 75
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_14185 noncanonical pyrimidine nucleotidase, YjjG family 0.40 CA264_15545 YajQ family cyclic di-GMP-binding protein low > 74
Enterobacter sp. TBS_079 0.23 MPMX20_00672 Pyrimidine 5'-nucleotidase YjjG 0.78 MPMX20_01017 hypothetical protein low > 85
Pantoea sp. MT58 0.22 IAI47_16360 pyrimidine 5'-nucleotidase 0.82 IAI47_14710 YajQ family cyclic di-GMP-binding protein low > 76
Shewanella amazonensis SB2B 0.22 Sama_0285 nucleotidase (RefSeq) 0.57 Sama_2557 putative nucleotide-binding protein (RefSeq) low > 62

Not shown: 7 genomes with orthologs for HER17_RS02445 only; 53 genomes with orthologs for HER17_RS15905 only