Conservation of cofitness between HER17_RS13490 and HER17_RS15870 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13490 NAD-dependent malic enzyme 1.0 HER17_RS15870 muropeptide MFS transporter AmpG 0.68 7
Dickeya dianthicola 67-19 0.89 HGI48_RS08645 NAD-dependent malic enzyme 0.72 HGI48_RS05665 muropeptide MFS transporter AmpG low > 71
Dickeya dianthicola ME23 0.89 DZA65_RS08935 NAD-dependent malic enzyme 0.71 DZA65_RS05990 muropeptide MFS transporter AmpG low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS08480 NAD-dependent malic enzyme 0.73 DDA3937_RS05620 muropeptide MFS transporter AmpG low > 74
Serratia liquefaciens MT49 0.88 IAI46_07935 NAD-dependent malic enzyme 0.78 IAI46_04990 muropeptide MFS transporter AmpG low > 86
Rahnella sp. WP5 0.86 EX31_RS18665 NAD-dependent malic enzyme 0.76 EX31_RS22225 muropeptide MFS transporter AmpG low > 89
Pantoea sp. MT58 0.82 IAI47_06755 NAD-dependent malic enzyme 0.67 IAI47_14675 muropeptide MFS transporter AmpG low > 76
Erwinia tracheiphila SCR3 0.78 LU632_RS08550 NAD-dependent malic enzyme 0.59 LU632_RS18370 ampG muropeptide MFS transporter AmpG low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02238 NAD-dependent malic enzyme 0.70 OHPLBJKB_03240 Protein AmpG low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.69 GFF4348 AmpG permease low > 78
Escherichia coli BL21 0.77 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 0.69 ECD_00384 muropeptide transporter — —
Escherichia coli BW25113 0.77 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 0.70 b0433 ampG muropeptide transporter (NCBI) low > 76
Escherichia coli ECRC62 0.77 BNILDI_17520 maeA malate dehydrogenase 0.70 BNILDI_22705 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli ECOR27 0.77 NOLOHH_19035 maeA malate dehydrogenase 0.70 NOLOHH_01290 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli ECOR38 0.77 HEPCGN_26435 maeA malate dehydrogenase 0.70 HEPCGN_06970 ampG muropeptide MFS transporter AmpG low > 87
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1103 Malic enzyme 0.71 EX28DRAFT_2538 AmpG-like permease low > 76
Escherichia fergusonii Becca 0.77 EFB2_02512 NAD-dependent malic enzyme 0.69 EFB2_03624 Anhydromuropeptide permease low > 86
Enterobacter sp. TBS_079 0.77 MPMX20_02369 NAD-dependent malic enzyme 0.71 MPMX20_01024 Anhydromuropeptide permease low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS13830 NAD-dependent malic enzyme 0.72 BWI76_RS06500 muropeptide transporter AmpG low > 92
Escherichia coli Nissle 1917 0.77 ECOLIN_RS08525 malate dehydrogenase 0.70 ECOLIN_RS02600 muropeptide MFS transporter AmpG — —
Escherichia coli ECRC102 0.77 NIAGMN_25490 maeA malate dehydrogenase 0.70 NIAGMN_06410 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC101 0.77 MCAODC_16580 maeA malate dehydrogenase 0.70 MCAODC_27580 ampG muropeptide MFS transporter AmpG low > 87
Escherichia coli ECRC100 0.77 OKFHMN_01360 maeA malate dehydrogenase 0.70 OKFHMN_08355 ampG muropeptide MFS transporter AmpG low > 80
Escherichia coli ECRC98 0.77 JDDGAC_03850 maeA malate dehydrogenase 0.70 JDDGAC_12010 ampG muropeptide MFS transporter AmpG low > 86
Escherichia coli ECRC99 0.77 KEDOAH_27080 maeA malate dehydrogenase 0.70 KEDOAH_19610 ampG muropeptide MFS transporter AmpG — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06015 NAD-dependent malic enzyme 0.18 CSW01_11705 MFS transporter low > 62
Shewanella sp. ANA-3 0.69 Shewana3_0750 malate dehydrogenase (RefSeq) 0.26 Shewana3_0783 major facilitator transporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.25 SO3814 ampG protein, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.69 Sama_2621 malate dehydrogenase (RefSeq) 0.25 Sama_2556 AmpG protein, putative (RefSeq) low > 62
Shewanella loihica PV-4 0.68 Shew_2962 malate dehydrogenase (RefSeq) 0.24 Shew_2892 major facilitator transporter (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.64 MIT1002_00455 NAD-dependent malic enzyme 0.21 MIT1002_00655 muropeptide transporter low > 70
Ralstonia solanacearum PSI07 0.35 RPSI07_RS13995 NAD-dependent malic enzyme 0.54 RPSI07_RS23200 MFS transporter low > 81

Not shown: 6 genomes with orthologs for HER17_RS13490 only; 12 genomes with orthologs for HER17_RS15870 only