Conservation of cofitness between HER17_RS13490 and HER17_RS11795 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13490 NAD-dependent malic enzyme 1.0 HER17_RS11795 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.64 15
Dickeya dianthicola 67-19 0.89 HGI48_RS08645 NAD-dependent malic enzyme 0.76 HGI48_RS10140 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 71
Dickeya dianthicola ME23 0.89 DZA65_RS08935 NAD-dependent malic enzyme 0.77 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS08480 NAD-dependent malic enzyme 0.76 DDA3937_RS10110 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Serratia liquefaciens MT49 0.88 IAI46_07935 NAD-dependent malic enzyme 0.79 IAI46_14595 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Rahnella sp. WP5 0.86 EX31_RS18665 NAD-dependent malic enzyme 0.78 EX31_RS10665 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 89
Pantoea sp. MT58 0.82 IAI47_06755 NAD-dependent malic enzyme 0.72 IAI47_08475 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Erwinia tracheiphila SCR3 0.78 LU632_RS08550 NAD-dependent malic enzyme 0.71 LU632_RS13385 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02238 NAD-dependent malic enzyme 0.70 OHPLBJKB_01873 Lipid A biosynthesis myristoyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.68 GFF1634 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) low > 78
Escherichia coli BL21 0.77 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 0.70 ECD_01826 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase — —
Escherichia coli BW25113 0.77 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 0.70 b1855 lpxM lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) low > 76
Escherichia coli ECRC62 0.77 BNILDI_17520 maeA malate dehydrogenase 0.70 BNILDI_15545 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECOR27 0.77 NOLOHH_19035 maeA malate dehydrogenase 0.70 NOLOHH_16755 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1103 Malic enzyme 0.69 EX28DRAFT_0701 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase — —
Escherichia fergusonii Becca 0.77 EFB2_02512 NAD-dependent malic enzyme 0.70 EFB2_02087 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli ECOR38 0.77 HEPCGN_26435 maeA malate dehydrogenase 0.69 HEPCGN_04720 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Enterobacter sp. TBS_079 0.77 MPMX20_02369 NAD-dependent malic enzyme 0.69 MPMX20_02760 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli Nissle 1917 0.77 ECOLIN_RS08525 malate dehydrogenase 0.71 ECOLIN_RS10335 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Klebsiella michiganensis M5al 0.77 BWI76_RS13830 NAD-dependent malic enzyme 0.71 BWI76_RS18120 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC101 0.77 MCAODC_16580 maeA malate dehydrogenase 0.70 MCAODC_19090 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Escherichia coli ECRC100 0.77 OKFHMN_01360 maeA malate dehydrogenase 0.70 OKFHMN_26315 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 80
Escherichia coli ECRC98 0.77 JDDGAC_03850 maeA malate dehydrogenase 0.70 JDDGAC_00890 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 86
Escherichia coli ECRC99 0.77 KEDOAH_27080 maeA malate dehydrogenase 0.69 KEDOAH_01790 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC102 0.77 NIAGMN_25490 maeA malate dehydrogenase 0.70 NIAGMN_01745 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06015 NAD-dependent malic enzyme 0.37 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.48 12
Shewanella sp. ANA-3 0.69 Shewana3_0750 malate dehydrogenase (RefSeq) 0.27 Shewana3_1866 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.69 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.25 SO2088 lipid A biosynthesis acyltransferase, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.69 Sama_2621 malate dehydrogenase (RefSeq) 0.28 Sama_1950 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.68 Shew_2962 malate dehydrogenase (RefSeq) 0.27 Shew_2213 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 60

Not shown: 8 genomes with orthologs for HER17_RS13490 only; 0 genomes with orthologs for HER17_RS11795 only