Conservation of cofitness between HER17_RS00665 and HER17_RS11795 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 1.0 HER17_RS11795 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.87 4
Pantoea sp. MT58 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR 0.72 IAI47_08475 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR 0.71 LU632_RS13385 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Rahnella sp. WP5 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR 0.78 EX31_RS10665 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 89
Dickeya dadantii 3937 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR 0.76 DDA3937_RS10110 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Dickeya dianthicola ME23 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.77 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.76 HGI48_RS10140 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 71
Enterobacter sp. TBS_079 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR 0.69 MPMX20_02760 Lipid A biosynthesis myristoyltransferase — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.69 EX28DRAFT_0701 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR 0.68 GFF1634 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) low > 78
Escherichia coli ECRC99 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR 0.69 KEDOAH_01790 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC98 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR 0.70 JDDGAC_00890 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.90 18
Escherichia coli ECRC101 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR 0.70 MCAODC_19090 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Escherichia coli Nissle 1917 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR 0.71 ECOLIN_RS10335 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli BW25113 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) 0.70 b1855 lpxM lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) low > 76
Escherichia coli ECOR27 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR 0.70 NOLOHH_16755 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECOR38 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.69 HEPCGN_04720 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.79 68
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR 0.70 OHPLBJKB_01873 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli BL21 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA 0.70 ECD_01826 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase low > 61
Klebsiella michiganensis M5al 0.85 BWI76_RS00720 DNA-binding response regulator 0.71 BWI76_RS18120 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC102 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR 0.70 NIAGMN_01745 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli ECRC100 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR 0.70 OKFHMN_26315 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.80 8
Escherichia coli ECRC62 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR 0.70 BNILDI_15545 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia fergusonii Becca 0.85 EFB2_04705 Transcriptional regulatory protein CpxR 0.70 EFB2_02087 Lipid A biosynthesis myristoyltransferase — —
Serratia liquefaciens MT49 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR 0.79 IAI46_14595 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_13590 DNA-binding response regulator 0.37 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 62
Shewanella loihica PV-4 0.54 Shew_3570 two component transcriptional regulator (RefSeq) 0.27 Shew_2213 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) 0.32 28
Shewanella amazonensis SB2B 0.52 Sama_3432 response regulator receiver protein (RefSeq) 0.28 Sama_1950 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.50 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) 0.25 SO2088 lipid A biosynthesis acyltransferase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.50 Shewana3_0253 two component transcriptional regulator (RefSeq) 0.27 Shewana3_1866 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) — —

Not shown: 9 genomes with orthologs for HER17_RS00665 only; 0 genomes with orthologs for HER17_RS11795 only