Conservation of cofitness between HER17_RS02010 and HER17_RS11245 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02010 transcriptional regulator 1.0 HER17_RS11245 fumarylacetoacetate hydrolase family protein 0.48 18
Dickeya dadantii 3937 0.93 DDA3937_RS19340 transcriptional regulator 0.91 DDA3937_RS11195 fumarylacetoacetate hydrolase family protein low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS20560 transcriptional regulator 0.90 DZA65_RS11575 fumarylacetoacetate hydrolase family protein low > 75
Dickeya dianthicola 67-19 0.92 HGI48_RS19440 transcriptional regulator 0.90 HGI48_RS11230 fumarylacetoacetate hydrolase family protein low > 71
Rahnella sp. WP5 0.92 EX31_RS04470 transcriptional regulator 0.82 EX31_RS10565 fumarylacetoacetate hydrolase family protein low > 89
Serratia liquefaciens MT49 0.91 IAI46_23490 transcriptional regulator 0.88 IAI46_14500 fumarylacetoacetate hydrolase family protein low > 86
Escherichia coli ECRC100 0.89 OKFHMN_17300 yheO Uncharacterized protein YheO 0.78 OKFHMN_28240 ycgM fumarylacetoacetate hydrolase family protein low > 80
Escherichia coli ECRC101 0.89 MCAODC_07830 yheO Uncharacterized protein YheO 0.78 MCAODC_21930 ycgM fumarylacetoacetate hydrolase family protein low > 87
Escherichia coli ECRC99 0.89 KEDOAH_10840 yheO Uncharacterized protein YheO 0.78 KEDOAH_25255 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECRC102 0.89 NIAGMN_15070 yheO Uncharacterized protein YheO 0.78 NIAGMN_27980 ycgM fumarylacetoacetate hydrolase family protein — —
Escherichia coli ECRC98 0.89 JDDGAC_20930 yheO Uncharacterized protein YheO 0.78 JDDGAC_06270 ycgM fumarylacetoacetate hydrolase family protein low > 86
Escherichia coli ECOR27 0.89 NOLOHH_09100 yheO Uncharacterized protein YheO 0.78 NOLOHH_20780 ycgM fumarylacetoacetate hydrolase family protein low > 75
Escherichia fergusonii Becca 0.89 EFB2_00477 Transcriptional regulator DauR 0.78 EFB2_02751 putative protein YcgM low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00357 Transcriptional regulator DauR 0.78 OHPLBJKB_02511 putative protein YcgM low > 73
Escherichia coli BW25113 0.89 b3346 yheO orf, hypothetical protein (VIMSS) 0.77 b1180 ycgM predicted isomerase/hydrolase (NCBI) low > 76
Escherichia coli BL21 0.89 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.78 ECD_01155 putative isomerase/hydrolase low > 61
Escherichia coli Nissle 1917 0.89 ECOLIN_RS19165 transcriptional regulator 0.78 ECOLIN_RS07140 fumarylacetoacetate hydrolase family protein low > 55
Escherichia coli ECRC62 0.89 BNILDI_02420 yheO Uncharacterized protein YheO 0.78 BNILDI_18940 ycgM fumarylacetoacetate hydrolase family protein low > 75
Escherichia coli ECOR38 0.88 HEPCGN_16130 yheO Uncharacterized protein YheO 0.78 HEPCGN_24690 ycgM fumarylacetoacetate hydrolase family protein low > 87
Klebsiella michiganensis M5al 0.88 BWI76_RS25905 hypothetical protein 0.76 BWI76_RS17770 isomerase/hydrolase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3726 YheO-like PAS domain 0.78 GFF2814 FIG094199: Fumarylacetoacetate hydrolase low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_04239 Transcriptional regulator DauR 0.75 MPMX20_02705 putative protein YcgM low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.77 EX28DRAFT_0760 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS22710 transcriptional regulator 0.78 LU632_RS13105 fumarylacetoacetate hydrolase family protein low > 74
Pantoea sp. MT58 0.86 IAI47_02055 transcriptional regulator 0.76 IAI47_08865 fumarylacetoacetate hydrolase family protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_01875 hypothetical protein 0.26 CSW01_19130 FAA hydrolase family protein low > 62
Shewanella oneidensis MR-1 0.34 SO1402 conserved hypothetical protein (NCBI ptt file) 0.27 SO1585 fumarylacetoacetate hydrolase family protein (NCBI ptt file) low > 76
Rhizobium sp. OAE497 0.14 ABIE40_RS21180 PAS domain-containing protein 0.31 ABIE40_RS10920 fumarylacetoacetate hydrolase family protein low > 107
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_923 YheO-like PAS domain 0.47 Pf1N1B4_2275 Fumarylacetoacetate hydrolase family protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_04640 hypothetical protein 0.47 AO353_08500 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.46 Pf6N2E2_3934 Fumarylacetoacetate hydrolase family protein low > 103
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_1693 YheO-like PAS domain 0.46 PfGW456L13_945 Fumarylacetoacetate hydrolase family protein low > 87
Pseudomonas sp. RS175 0.12 PFR28_03547 Transcriptional regulator DauR 0.46 PFR28_04840 putative protein YcgM low > 88

Not shown: 3 genomes with orthologs for HER17_RS02010 only; 63 genomes with orthologs for HER17_RS11245 only