Conservation of cofitness between HER17_RS00785 and HER17_RS07135 in Pectobacterium carotovorum WPP14

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00785 agmatine deiminase 1.0 HER17_RS07135 NADH-quinone oxidoreductase subunit C/D 0.65 8
Dickeya dadantii 3937 0.82 DDA3937_RS00855 agmatine deiminase 0.93 DDA3937_RS14325 NADH-quinone oxidoreductase subunit C/D — —
Dickeya dianthicola 67-19 0.80 HGI48_RS20520 agmatine deiminase 0.93 HGI48_RS14300 NADH-quinone oxidoreductase subunit C/D low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS21565 agmatine deiminase 0.93 DZA65_RS14975 NADH-quinone oxidoreductase subunit C/D — —
Shewanella oneidensis MR-1 0.68 SO_0887 agmatine deiminase (RefSeq) 0.78 SO1019 nuoCD NADH dehydrogenase I, C/D subunits (NCBI ptt file) low > 76
Rahnella sp. WP5 0.67 EX31_RS21180 agmatine deiminase 0.92 EX31_RS19425 NADH-quinone oxidoreductase subunit C/D low > 89
Pseudomonas sp. S08-1 0.57 OH686_11505 agmatine deiminase 0.77 OH686_00145 NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone oxidoreductase chain D low > 80
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_11915 agmatine deiminase 0.77 AO353_27750 NADH:ubiquinone oxidoreductase — —
Pseudomonas putida KT2440 0.55 PP_0266 Agmatine deiminase 0.77 PP_4121 NADH-quinone oxidoreductase subunit C/D low > 96
Pseudomonas sp. RS175 0.55 PFR28_04897 Agmatine deiminase 0.78 PFR28_02629 NADH-quinone oxidoreductase subunit C/D — —
Pseudomonas simiae WCS417 0.55 PS417_01340 agmatine deiminase 0.77 PS417_16585 NADH:ubiquinone oxidoreductase — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) 0.77 Pf6N2E2_275 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS01435 agmatine deiminase 0.77 PFLU_RS18625 NADH-quinone oxidoreductase subunit C/D low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS01435 agmatine deiminase 0.77 PFLU_RS18625 NADH-quinone oxidoreductase subunit C/D low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) 0.77 AO356_22060 NADH:ubiquinone oxidoreductase — —
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) 0.77 Pf1N1B4_4039 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) low > 87
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) 0.76 PfGW456L13_2631 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_4932 agmatine deiminase 0.77 Psyr_3199 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_4932 agmatine deiminase 0.77 Psyr_3199 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C low > 86
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS14245 agmatine deiminase family protein 0.22 HMPREF1181_RS09010 NADH-quinone oxidoreductase subunit D low > 56
Bacteroides ovatus ATCC 8483 0.23 BACOVA_02593 hypothetical protein 0.23 BACOVA_04860 respiratory-chain NADH dehydrogenase, 49 Kd subunit low > 94
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS04370 agmatine deiminase family protein 0.23 HMPREF1058_RS13325 NADH-quinone oxidoreductase subunit D low > 67
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS16700 agmatine deiminase family protein 0.22 ABI39_RS08530 NADH-quinone oxidoreductase subunit D low > 72
Bacteroides thetaiotaomicron VPI-5482 0.20 BT0876 conserved hypothetical protein (NCBI ptt file) 0.23 BT4065 NADH dehydrogenase I, chain D (NCBI ptt file) low > 81
Serratia liquefaciens MT49 0.19 IAI46_12735 agmatine deiminase family protein 0.92 IAI46_17700 NADH-quinone oxidoreductase subunit C/D low > 86

Not shown: 25 genomes with orthologs for HER17_RS00785 only; 22 genomes with orthologs for HER17_RS07135 only