Conservation of cofitness between HER17_RS12300 and HER17_RS06280 in Pectobacterium carotovorum WPP14

29 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pectobacterium carotovorum WPP14	1.0	HER17_RS12300		formate transporter FocA	1.0	HER17_RS06280		tRNA 5-hydroxyuridine modification protein YegQ	0.89	10
Dickeya dianthicola ME23	0.88	DZA65_RS09980		formate transporter FocA	0.88	DZA65_RS16195		tRNA 5-hydroxyuridine modification protein YegQ	low	> 75
Serratia liquefaciens MT49	0.88	IAI46_08615		formate transporter FocA	0.87	IAI46_19015		tRNA 5-hydroxyuridine modification protein YegQ	low	> 86
Dickeya dadantii 3937	0.88	DDA3937_RS09660		formate transporter FocA	0.90	DDA3937_RS15295		tRNA 5-hydroxyuridine modification protein YegQ	low	> 74
Dickeya dianthicola 67-19	0.87	HGI48_RS09670		formate transporter FocA	0.88	HGI48_RS15375		tRNA 5-hydroxyuridine modification protein YegQ	low	> 71
Rahnella sp. WP5	0.85	EX31_RS18265		formate transporter FocA	0.87	EX31_RS20325		tRNA 5-hydroxyuridine modification protein YegQ	low	> 89
Klebsiella michiganensis M5al	0.83	BWI76_RS09740		formate transporter FocA	0.85	BWI76_RS19280		U32 family peptidase	low	> 92
Escherichia coli BL21	0.83	ECD_00908		formate channel	0.83	ECD_01986		putative peptidase	low	> 61
Escherichia coli Nissle 1917	0.83	ECOLIN_RS04790		formate transporter FocA	0.83	ECOLIN_RS12250		tRNA 5-hydroxyuridine modification protein YegQ	low	> 55
Escherichia coli HS(pFamp)R (ATCC 700891)	0.83	OHPLBJKB_02764		putative formate transporter 1	0.83	OHPLBJKB_01623		putative protease YdcP	low	> 73
Escherichia coli BW25113	0.83	b0904	focA	formate transporter (NCBI)	0.83	b2081	yegQ	predicted peptidase (NCBI)	low	> 76
Escherichia coli ECOR27	0.83	NOLOHH_22065	focA	formate transporter FocA	0.83	NOLOHH_15500	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	low	> 75
Escherichia coli ECRC100	0.83	OKFHMN_05505	focA	formate transporter FocA	0.83	OKFHMN_24165	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	low	> 80
Escherichia coli ECRC62	0.83	BNILDI_20320	focA	formate transporter FocA	0.83	BNILDI_14415	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	low	> 75
Escherichia coli ECRC98	0.83	JDDGAC_09115	focA	formate transporter FocA	0.83	JDDGAC_28275	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	low	> 86
Escherichia coli ECRC99	0.83	KEDOAH_22230	focA	formate transporter FocA	0.83	KEDOAH_03985	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	—	—
Escherichia coli ECRC101	0.83	MCAODC_24895	focA	formate transporter FocA	0.83	MCAODC_20775	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	low	> 87
Escherichia coli ECRC102	0.83	NIAGMN_03225	focA	formate transporter FocA	0.83	NIAGMN_22110	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	—	—
Erwinia tracheiphila SCR3	0.80	LU632_RS09780	focA	formate transporter FocA	0.79	LU632_RS08665	yegQ	tRNA 5-hydroxyuridine modification protein YegQ	low	> 74
Pantoea sp. MT58	0.80	IAI47_12875		formate transporter FocA	0.81	IAI47_06845		tRNA 5-hydroxyuridine modification protein YegQ	low	> 76
Enterobacter sp. TBS_079	0.78	MPMX20_01563		putative formate transporter 1	0.83	MPMX20_03067		23S rRNA 5-hydroxycytidine synthase	low	> 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	0.78	GFF3661		Formate efflux transporter (TC 2.A.44 family)	0.84	GFF3846		Putative protease	low	> 78
Vibrio cholerae E7946 ATCC 55056	0.52	CSW01_08525		formate transporter FocA	0.75	CSW01_03750		U32 family peptidase	low	> 62
Fusobacterium nucleatum SB010	0.21	HUW76_06065		formate/nitrite transporter family protein	0.32	HUW76_02115		U32 family peptidase	low	> 35
Methanococcus maripaludis JJ	0.18	MMJJ_RS07650		formate/nitrite transporter family protein	0.19	MMJJ_RS01595		U32 family peptidase	low	> 28
Methanococcus maripaludis S2	0.18	MMP_RS06705		formate/nitrite transporter family protein	0.19	MMP_RS03460		U32 family peptidase	low	> 25
Alteromonas macleodii MIT1002	0.16	MIT1002_01529		Formate channel 1	0.71	MIT1002_02342		putative protease YhbU precursor	low	> 70
Pseudomonas sp. S08-1	0.14	OH686_20565		Nitrite transporter from formate/nitrite family	0.72	OH686_13055		Uncharacterized protease YegQ	low	> 80
Marinobacter adhaerens HP15	0.13	HP15_3885		formate and nitrite transporter	0.58	HP15_2983		peptidase, U32 family	low	> 73
Pseudomonas stutzeri RCH2	0.13	Psest_2408		Formate/nitrite family of transporters	0.78	Psest_4096		Collagenase and related proteases	low	> 67

Not shown: 8 genomes with orthologs for HER17_RS12300 only; 23 genomes with orthologs for HER17_RS06280 only