Conservation of cofitness between HER17_RS12035 and HER17_RS05880 in Pectobacterium carotovorum WPP14

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12035 MBL fold metallo-hydrolase 1.0 HER17_RS05880 EAL domain-containing protein 0.56 20
Marinobacter adhaerens HP15 0.64 HP15_1191 metallo-beta-lactamase family protein 0.19 HP15_3218 diguanylate cyclase/phosphodiesterase low > 73
Shewanella amazonensis SB2B 0.62 Sama_2142 metallo-beta-lactamase family protein (RefSeq) 0.13 Sama_3264 putative diguanylate phosphodiesterase (RefSeq) 0.28 23
Shewanella oneidensis MR-1 0.61 SO3054 metallo-beta-lactamase family protein (NCBI ptt file) 0.13 SO4323 GGDEF domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_1493 beta-lactamase domain-containing protein (RefSeq) 0.13 Shewana3_0376 diguanylate cyclase/phosphodiesterase (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_2269 beta-lactamase domain-containing protein (RefSeq) 0.13 Shew_0307 diguanylate cyclase/phosphodiesterase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_06415 MBL fold metallo-hydrolase 0.13 CSW01_19490 GGDEF domain-containing protein low > 62
Alteromonas macleodii MIT1002 0.57 MIT1002_03450 Beta-lactamase hydrolase-like protein 0.19 MIT1002_01618 Cyclic di-GMP phosphodiesterase Gmr low > 70
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3348 Hypothetical metal-binding enzyme, YcbL homolog 0.23 Ac3H11_2106 Membrane bound c-di-GMP receptor LapD
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1623 Hypothetical metal-binding enzyme, YcbL homolog 0.54 PfGW456L13_546 Membrane bound c-di-GMP receptor LapD low > 87
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2963 Hypothetical metal-binding enzyme, YcbL homolog 0.56 Pf1N1B4_1802 Membrane bound c-di-GMP receptor LapD low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_15160 MBL fold metallo-hydrolase 0.56 AO353_11170 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.32 Psest_3219 Zn-dependent hydrolases, including glyoxylases 0.46 Psest_1864 diguanylate cyclase (GGDEF) domain low > 67
Pseudomonas putida KT2440 0.32 PP_0772 Metallo-beta-lactamase family protein 0.52 PP_0165 GGDEF domain protein low > 96
Pseudomonas sp. S08-1 0.29 OH686_06295 MBL-fold metallo-hydrolase superfamily 0.52 OH686_20650 Membrane bound c-di-GMP receptor LapD low > 80

Not shown: 69 genomes with orthologs for HER17_RS12035 only; 4 genomes with orthologs for HER17_RS05880 only