Conservation of cofitness between HER17_RS11145 and HER17_RS05665 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11145 MipA/OmpV family protein 1.0 HER17_RS05665 CdaR family transcriptional regulator 0.49 13
Dickeya dianthicola 67-19 0.63 HGI48_RS10260 MipA/OmpV family protein 0.91 HGI48_RS15995 CdaR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS10735 MipA/OmpV family protein 0.91 DZA65_RS17080 CdaR family transcriptional regulator low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS10250 MipA/OmpV family protein 0.91 DDA3937_RS15855 CdaR family transcriptional regulator low > 74
Serratia liquefaciens MT49 0.56 IAI46_14365 MipA/OmpV family protein 0.34 IAI46_05255 helix-turn-helix domain-containing protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3474 MltA-interacting protein MipA 0.85 GFF59 Sugar diacid utilization regulator SdaR low > 78
Escherichia coli Nissle 1917 0.54 ECOLIN_RS09935 scaffolding protein MipA 0.85 ECOLIN_RS00900 DNA-binding transcriptional regulator CdaR low > 55
Enterobacter sp. TBS_079 0.54 MPMX20_01841 MltA-interacting protein 0.84 MPMX20_00848 Carbohydrate diacid regulator low > 85
Klebsiella michiganensis M5al 0.53 BWI76_RS11490 MltA-interacting protein MipA 0.84 BWI76_RS05185 CdaR family transcriptional regulator low > 92
Escherichia fergusonii Becca 0.53 EFB2_02212 MltA-interacting protein 0.85 EFB2_03882 Carbohydrate diacid regulator low > 86
Escherichia coli BW25113 0.53 b1782 mipA scaffolding protein for murein synthesizing machinery (NCBI) 0.85 b0162 yaeG orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_01950 MltA-interacting protein 0.85 OHPLBJKB_03500 Carbohydrate diacid regulator low > 73
Escherichia coli BL21 0.53 ECD_01751 scaffolding protein for murein synthesizing machinery 0.85 ECD_00161 carbohydrate diacid regulon transcriptional regulator; autoregulator low > 61
Escherichia coli ECOR38 0.53 HEPCGN_05105 mipA scaffolding protein MipA 0.85 HEPCGN_08200 cdaR DNA-binding transcriptional regulator CdaR low > 87
Escherichia coli ECOR27 0.53 NOLOHH_17245 mipA scaffolding protein MipA 0.85 NOLOHH_02595 cdaR DNA-binding transcriptional regulator CdaR low > 75
Escherichia coli ECRC62 0.53 BNILDI_16030 mipA scaffolding protein MipA 0.85 BNILDI_09075 cdaR DNA-binding transcriptional regulator CdaR low > 75
Escherichia coli ECRC101 0.53 MCAODC_18695 mipA scaffolding protein MipA 0.85 MCAODC_00765 cdaR DNA-binding transcriptional regulator CdaR low > 87
Escherichia coli ECRC100 0.53 OKFHMN_26715 mipA scaffolding protein MipA 0.85 OKFHMN_10250 cdaR DNA-binding transcriptional regulator CdaR low > 80
Escherichia coli ECRC99 0.53 KEDOAH_01395 mipA scaffolding protein MipA 0.85 KEDOAH_17905 cdaR DNA-binding transcriptional regulator CdaR — —
Escherichia coli ECRC98 0.53 JDDGAC_01290 mipA scaffolding protein MipA 0.85 JDDGAC_13845 cdaR DNA-binding transcriptional regulator CdaR low > 86
Escherichia coli ECRC102 0.53 NIAGMN_01350 mipA scaffolding protein MipA 0.85 NIAGMN_08100 cdaR DNA-binding transcriptional regulator CdaR — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1775 Outer membrane protein V 0.84 EX28DRAFT_3751 Sugar diacid utilization regulator low > 76
Pantoea sp. MT58 0.52 IAI47_08930 MipA/OmpV family protein 0.83 IAI47_15555 CdaR family transcriptional regulator low > 76
Rahnella sp. WP5 0.49 EX31_RS06265 MipA/OmpV family protein 0.85 EX31_RS03165 CdaR family transcriptional regulator low > 89
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_2376 MltA-interacting MipA 0.25 Psyr_3116 transcriptional regulator, CdaR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_2376 MltA-interacting MipA 0.25 Psyr_3116 transcriptional regulator, CdaR family low > 86
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_06655 outer membrane protein OmpV 0.35 CSW01_18670 CdaR family transcriptional regulator low > 62
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS33055 MipA/OmpV family protein 0.29 QEN71_RS12200 sugar diacid recognition domain-containing protein low > 153
Pseudomonas sp. RS175 0.14 PFR28_02067 MltA-interacting protein 0.26 PFR28_02470 Carbohydrate diacid regulator low > 88
Pseudomonas fluorescens FW300-N2C3 0.13 AO356_28855 structural protein MipA 0.27 AO356_22865 CdaR family transcriptional regulator low > 104
Shewanella oneidensis MR-1 0.12 SO3592 conserved hypothetical protein (NCBI ptt file) 0.42 SO1774 hypothetical Sugar diacid utilization regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.12 Shewana3_3182 MltA-interacting MipA family protein (RefSeq) 0.41 Shewana3_2682 CdaR family transcriptional regulator (RefSeq) low > 73

Not shown: 3 genomes with orthologs for HER17_RS11145 only; 10 genomes with orthologs for HER17_RS05665 only