Conservation of cofitness between HER17_RS12030 and HER17_RS05550 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS05550 aspartate 1-decarboxylase 0.88 18
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.92 IAI46_21250 aspartate 1-decarboxylase low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.82 BNILDI_08910 panD aspartate 1-decarboxylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.82 OHPLBJKB_03530 Aspartate 1-decarboxylase low > 73
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.82 HEPCGN_08395 panD aspartate 1-decarboxylase low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.82 b0131 panD aspartate 1-decarboxylase precursor (NCBI) low > 76
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.82 ECD_00130 aspartate 1-decarboxylase — —
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.82 NOLOHH_02760 panD aspartate 1-decarboxylase low > 75
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.82 ECOLIN_RS00725 aspartate 1-decarboxylase — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.90 EX31_RS03290 aspartate 1-decarboxylase low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.82 EFB2_03914 Aspartate 1-decarboxylase low > 86
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.82 MCAODC_00930 panD aspartate 1-decarboxylase low > 87
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.82 KEDOAH_17740 panD aspartate 1-decarboxylase — —
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.82 JDDGAC_14010 panD aspartate 1-decarboxylase low > 86
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.82 NIAGMN_08265 panD aspartate 1-decarboxylase — —
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.82 OKFHMN_10415 panD aspartate 1-decarboxylase 0.86 3
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.81 BWI76_RS04985 aspartate 1-decarboxylase low > 92
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.90 HGI48_RS16080 aspartate 1-decarboxylase 0.82 9
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.82 MPMX20_00825 Aspartate 1-decarboxylase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.83 GFF93 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.91 DDA3937_RS15965 aspartate 1-decarboxylase 0.82 7
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.81 EX28DRAFT_3728 L-aspartate 1-decarboxylase (EC 4.1.1.11) low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.90 DZA65_RS17165 aspartate 1-decarboxylase 0.86 2
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.83 IAI47_15665 aspartate 1-decarboxylase low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.85 LU632_RS20110 panD aspartate 1-decarboxylase 0.75 38
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.38 ABCV34_RS05880 aspartate 1-decarboxylase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.47 Xcc-8004.3050.1 Aspartate 1-decarboxylase (EC 4.1.1.11) — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.47 OKGIIK_03895 panD aspartate 1-decarboxylase low > 52
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.58 Pf6N2E2_5151 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 103
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.47 LRK54_RS15125 aspartate 1-decarboxylase — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.58 PfGW456L13_1519 Aspartate 1-decarboxylase (EC 4.1.1.11) low > 87
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.58 PFR28_03723 Aspartate 1-decarboxylase low > 88
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.47 LRK55_RS14840 aspartate 1-decarboxylase low > 63
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.57 OH686_17235 aspartate 1-decarboxylase low > 80

Not shown: 18 genomes with orthologs for HER17_RS12030 only; 35 genomes with orthologs for HER17_RS05550 only