Conservation of cofitness between HER17_RS10870 and HER17_RS05380 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10870 HTH-type transcriptional regulator CysB 1.0 HER17_RS05380 bifunctional chorismate mutase/prephenate dehydrogenase 0.95 12
Dickeya dadantii 3937 0.95 DDA3937_RS10540 HTH-type transcriptional regulator CysB 0.86 DDA3937_RS16135 bifunctional chorismate mutase/prephenate dehydrogenase — —
Dickeya dianthicola ME23 0.95 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.86 DZA65_RS17350 bifunctional chorismate mutase/prephenate dehydrogenase — —
Dickeya dianthicola 67-19 0.95 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.86 HGI48_RS16255 bifunctional chorismate mutase/prephenate dehydrogenase — —
Serratia liquefaciens MT49 0.93 IAI46_13965 HTH-type transcriptional regulator CysB 0.85 IAI46_03960 bifunctional chorismate mutase/prephenate dehydrogenase — —
Rahnella sp. WP5 0.93 EX31_RS09890 HTH-type transcriptional regulator CysB 0.83 EX31_RS07590 bifunctional chorismate mutase/prephenate dehydrogenase 0.85 79
Klebsiella michiganensis M5al 0.92 BWI76_RS11930 LysR family transcriptional regulator CysB 0.86 BWI76_RS21475 bifunctional chorismate mutase/prephenate dehydrogenase — —
Erwinia tracheiphila SCR3 0.92 LU632_RS12550 cysB HTH-type transcriptional regulator CysB 0.85 LU632_RS15445 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Enterobacter sp. TBS_079 0.91 MPMX20_02501 HTH-type transcriptional regulator CysB 0.87 MPMX20_03468 T-protein — —
Escherichia coli ECOR38 0.91 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.88 HEPCGN_20340 tyrA bifunctional chorismate mutase/prephenate dehydrogenase 0.78 46
Escherichia coli ECRC98 0.91 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB 0.88 JDDGAC_24885 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli ECRC99 0.91 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB 0.88 KEDOAH_07000 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli BW25113 0.91 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) 0.88 b2600 tyrA fused chorismate mutase T/prephenate dehydrogenase (NCBI) — —
Escherichia coli ECRC62 0.91 BNILDI_18415 cysB HTH-type transcriptional regulator CysB 0.88 BNILDI_11700 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia fergusonii Becca 0.91 EFB2_02652 HTH-type transcriptional regulator CysB 0.88 EFB2_01292 T-protein — —
Escherichia coli ECOR27 0.91 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB 0.88 NOLOHH_12895 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli Nissle 1917 0.91 ECOLIN_RS07680 HTH-type transcriptional regulator CysB 0.88 ECOLIN_RS14700 bifunctional chorismate mutase/prephenate dehydrogenase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_02409 HTH-type transcriptional regulator CysB 0.88 OHPLBJKB_01108 T-protein low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2712 Cys regulon transcriptional activator CysB 0.87 GFF4177 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) — —
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0946 Transcriptional regulator 0.88 EX28DRAFT_2701 chorismate mutase (EC 5.4.99.5) — —
Escherichia coli BL21 0.91 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor 0.88 ECD_02489 fused chorismate mutase T/prephenate dehydrogenase — —
Escherichia coli ECRC101 0.91 MCAODC_15665 cysB HTH-type transcriptional regulator CysB 0.88 MCAODC_11750 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli ECRC102 0.91 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB 0.88 NIAGMN_18990 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Escherichia coli ECRC100 0.91 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB 0.88 OKFHMN_21220 tyrA bifunctional chorismate mutase/prephenate dehydrogenase — —
Pantoea sp. MT58 0.90 IAI47_09240 HTH-type transcriptional regulator CysB 0.85 IAI47_04405 bifunctional chorismate mutase/prephenate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.80 CSW01_09545 HTH-type transcriptional regulator CysB 0.68 CSW01_03640 bifunctional chorismate mutase/prephenate dehydrogenase — —
Alteromonas macleodii MIT1002 0.78 MIT1002_02005 Cys regulon transcriptional activator 0.57 MIT1002_01315 T-protein — —
Shewanella amazonensis SB2B 0.75 Sama_1324 cysB transcriptional regulator CysB (RefSeq) 0.59 Sama_0894 tyrA bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.75 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) 0.58 SO1362 tyrA chorismate mutase/prephenate dehydrogenase (NCBI ptt file) 0.81 56
Shewanella loihica PV-4 0.75 Shew_1624 cysB transcriptional regulator CysB (RefSeq) 0.57 Shew_1068 tyrA bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) — —
Shewanella sp. ANA-3 0.75 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) 0.58 Shewana3_3012 tyrA bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) — —

Not shown: 29 genomes with orthologs for HER17_RS10870 only; 0 genomes with orthologs for HER17_RS05380 only