Conservation of cofitness between HER17_RS16590 and HER17_RS04340 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16590 DNA mismatch repair endonuclease MutH 1.0 HER17_RS04340 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.58 11
Dickeya dadantii 3937 0.82 DDA3937_RS04940 DNA mismatch repair endonuclease MutH 0.88 DDA3937_RS16885 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS05285 DNA mismatch repair endonuclease MutH 0.87 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS04950 DNA mismatch repair endonuclease MutH 0.87 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Serratia liquefaciens MT49 0.77 IAI46_20460 DNA mismatch repair endonuclease MutH 0.90 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Rahnella sp. WP5 0.77 EX31_RS13210 DNA mismatch repair endonuclease MutH 0.83 EX31_RS07835 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 89
Enterobacter asburiae PDN3 0.75 EX28DRAFT_2906 DNA mismatch repair protein MutH 0.84 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_03694 DNA mismatch repair protein MutH 0.83 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF1314 DNA mismatch repair endonuclease MutH 0.83 GFF4791 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 78
Erwinia tracheiphila SCR3 0.73 LU632_RS06095 mutH DNA mismatch repair endonuclease MutH 0.81 LU632_RS06470 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Escherichia coli ECOR38 0.73 HEPCGN_19245 mutH DNA mismatch repair endonuclease MutH 0.83 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli ECRC99 0.73 KEDOAH_08140 mutH DNA mismatch repair endonuclease MutH 0.83 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli ECRC101 0.73 MCAODC_10515 mutH DNA mismatch repair endonuclease MutH 0.83 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli ECRC98 0.73 JDDGAC_23655 mutH DNA mismatch repair endonuclease MutH 0.83 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli ECRC100 0.73 OKFHMN_19990 mutH DNA mismatch repair endonuclease MutH 0.83 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase low > 80
Escherichia fergusonii Becca 0.73 EFB2_01052 DNA mismatch repair protein MutH 0.83 EFB2_01167 Protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli ECOR27 0.73 NOLOHH_11875 mutH DNA mismatch repair endonuclease MutH 0.83 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli ECRC102 0.73 NIAGMN_17760 mutH DNA mismatch repair endonuclease MutH 0.83 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS15895 DNA mismatch repair endonuclease MutH 0.83 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase low > 55
Pantoea sp. MT58 0.73 IAI47_03910 DNA mismatch repair endonuclease MutH 0.77 IAI47_04225 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Escherichia coli BW25113 0.73 b2831 mutH DNA mismatch repair protein (NCBI) 0.83 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) low > 76
Escherichia coli BL21 0.73 ECD_02679 methyl-directed mismatch repair protein 0.83 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00898 DNA mismatch repair protein MutH 0.83 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase low > 73
Escherichia coli ECRC62 0.72 BNILDI_10355 mutH DNA mismatch repair endonuclease MutH 0.83 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase low > 75
Klebsiella michiganensis M5al 0.72 BWI76_RS23290 DNA mismatch repair protein MutH 0.84 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase 0.18 40
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_03515 DNA mismatch repair protein MutH 0.68 CSW01_02825 protein-L-isoaspartate O-methyltransferase low > 62
Shewanella loihica PV-4 0.62 Shew_1037 DNA mismatch repair protein (RefSeq) 0.61 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.60 Shewana3_3044 DNA mismatch repair protein (RefSeq) 0.60 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.60 SO1330 mutH DNA mismatch repair protein MutH (NCBI ptt file) 0.60 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.56 MIT1002_00646 Methyl-directed mismatch repair protein 0.60 MIT1002_00628 Protein-L-isoaspartate O-methyltransferase low > 70
Shewanella amazonensis SB2B 0.56 Sama_0862 DNA mismatch repair protein (RefSeq) 0.60 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0550 DNA mismatch repair protein MutH 0.52 B158DRAFT_2297 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 40

Not shown: 0 genomes with orthologs for HER17_RS16590 only; 45 genomes with orthologs for HER17_RS04340 only