Conservation of cofitness between HER17_RS12030 and HER17_RS03105 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS03105 catabolite repressor/activator 0.88 19
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.87 IAI46_03385 catabolite repressor/activator low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.87 BNILDI_08580 cra catabolite repressor/activator low > 75
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.87 NOLOHH_03030 cra catabolite repressor/activator low > 75
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.88 ECD_00081 transcriptional repressor-activator for carbon metabolism — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.88 OHPLBJKB_03579 Catabolite repressor/activator low > 73
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.88 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.87 HEPCGN_08665 cra catabolite repressor/activator low > 87
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.86 EX31_RS03655 catabolite repressor/activator low > 89
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.88 ECOLIN_RS00430 catabolite repressor/activator — —
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.88 EFB2_03967 Catabolite repressor/activator low > 86
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.87 NIAGMN_08535 cra catabolite repressor/activator — —
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.87 OKFHMN_10685 cra catabolite repressor/activator low > 80
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.87 MCAODC_01200 cra catabolite repressor/activator low > 87
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.87 KEDOAH_17470 cra catabolite repressor/activator — —
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.87 JDDGAC_14280 cra catabolite repressor/activator low > 86
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.91 HGI48_RS18030 catabolite repressor/activator low > 71
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.88 BWI76_RS04705 DNA-binding transcriptional regulator FruR low > 92
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.87 MPMX20_00773 Catabolite repressor/activator low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.87 GFF158 Fructose repressor FruR, LacI family low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.91 DDA3937_RS18095 catabolite repressor/activator low > 74
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.87 EX28DRAFT_3675 transcriptional regulator, LacI family low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.91 DZA65_RS19175 catabolite repressor/activator low > 75
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.87 IAI47_15980 catabolite repressor/activator low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.84 LU632_RS02900 cra catabolite repressor/activator low > 74
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.38 CSW01_16835 catabolite repressor/activator low > 62
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.38 AO356_07340 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.37 Pf6N2E2_3340 Fructose repressor FruR, LacI family low > 103
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.37 PS417_03960 transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.37 PfGW456L13_5077 Fructose repressor FruR, LacI family low > 87
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.37 PFLU_RS04005 catabolite repressor/activator low > 109
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.37 PFLU_RS04005 catabolite repressor/activator low > 109
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.38 PFR28_00104 Catabolite repressor/activator low > 88
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.36 Psyr_0820 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.36 Psyr_0820 transcriptional regulator, LacI family low > 86

Not shown: 17 genomes with orthologs for HER17_RS12030 only; 4 genomes with orthologs for HER17_RS03105 only