Conservation of cofitness between HER17_RS11145 and HER17_RS01040 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11145 MipA/OmpV family protein 1.0 HER17_RS01040 HTH-type transcriptional regulator HdfR 0.51 8
Dickeya dianthicola 67-19 0.63 HGI48_RS10260 MipA/OmpV family protein 0.77 HGI48_RS20335 HTH-type transcriptional regulator HdfR low > 71
Dickeya dianthicola ME23 0.62 DZA65_RS10735 MipA/OmpV family protein 0.77 DZA65_RS21375 HTH-type transcriptional regulator HdfR low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS10250 MipA/OmpV family protein 0.77 DDA3937_RS20190 HTH-type transcriptional regulator HdfR low > 74
Serratia liquefaciens MT49 0.56 IAI46_14365 MipA/OmpV family protein 0.79 IAI46_24385 HTH-type transcriptional regulator HdfR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3474 MltA-interacting protein MipA 0.63 GFF2907 HTH-type transcriptional regulator hdfR low > 78
Enterobacter sp. TBS_079 0.54 MPMX20_01841 MltA-interacting protein 0.63 MPMX20_04505 HTH-type transcriptional regulator HdfR low > 85
Escherichia coli Nissle 1917 0.54 ECOLIN_RS09935 scaffolding protein MipA 0.63 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR low > 55
Klebsiella michiganensis M5al 0.53 BWI76_RS11490 MltA-interacting protein MipA 0.64 BWI76_RS00940 transcriptional regulator HdfR low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_01950 MltA-interacting protein 0.62 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR low > 73
Escherichia coli BW25113 0.53 b1782 mipA scaffolding protein for murein synthesizing machinery (NCBI) 0.62 b4480 hdfR transcriptional regulator HdfR (NCBI) low > 76
Escherichia fergusonii Becca 0.53 EFB2_02212 MltA-interacting protein 0.63 EFB2_04871 HTH-type transcriptional regulator HdfR low > 86
Escherichia coli BL21 0.53 ECD_01751 scaffolding protein for murein synthesizing machinery 0.62 ECD_03642 flhDC operon transcriptional repressor low > 61
Escherichia coli ECRC62 0.53 BNILDI_16030 mipA scaffolding protein MipA 0.62 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli ECOR38 0.53 HEPCGN_05105 mipA scaffolding protein MipA 0.62 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia coli ECOR27 0.53 NOLOHH_17245 mipA scaffolding protein MipA 0.62 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli ECRC100 0.53 OKFHMN_26715 mipA scaffolding protein MipA 0.62 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR low > 80
Escherichia coli ECRC99 0.53 KEDOAH_01395 mipA scaffolding protein MipA 0.62 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECRC102 0.53 NIAGMN_01350 mipA scaffolding protein MipA 0.62 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECRC98 0.53 JDDGAC_01290 mipA scaffolding protein MipA 0.62 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR low > 86
Escherichia coli ECRC101 0.53 MCAODC_18695 mipA scaffolding protein MipA 0.62 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR low > 87
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1775 Outer membrane protein V 0.63 EX28DRAFT_4436 Transcriptional regulator low > 76
Pantoea sp. MT58 0.52 IAI47_08930 MipA/OmpV family protein 0.72 IAI47_01000 HTH-type transcriptional regulator HdfR low > 76
Rahnella sp. WP5 0.49 EX31_RS06265 MipA/OmpV family protein 0.77 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_06655 outer membrane protein OmpV 0.29 CSW01_19195 LysR family transcriptional regulator low > 62
Dinoroseobacter shibae DFL-12 0.15 Dshi_0808 MltA-interacting MipA family protein (RefSeq) 0.21 Dshi_2990 transcriptional regulator, LysR family (RefSeq) low > 64
Pseudomonas sp. RS175 0.14 PFR28_02067 MltA-interacting protein 0.19 PFR28_01360 HTH-type transcriptional regulator HdfR low > 88
Pseudomonas fluorescens FW300-N2C3 0.13 AO356_28855 structural protein MipA 0.19 AO356_00585 LysR family transcriptional regulator low > 104
Shewanella oneidensis MR-1 0.12 SO3592 conserved hypothetical protein (NCBI ptt file) 0.37 SO2202 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.12 MIT1002_00907 MltA-interacting protein precursor 0.23 MIT1002_02368 HTH-type transcriptional activator AllS low > 70
Shewanella sp. ANA-3 0.12 Shewana3_3182 MltA-interacting MipA family protein (RefSeq) 0.37 Shewana3_2403 LysR family transcriptional regulator (RefSeq) low > 73

Not shown: 4 genomes with orthologs for HER17_RS11145 only; 15 genomes with orthologs for HER17_RS01040 only