| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS08615 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 1.0 | HER17_RS00845 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | 0.80 | 16 |
| Rahnella sp. WP5 | 0.85 | EX31_RS24400 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.59 | EX31_RS14250 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 89 |
| Dickeya dianthicola 67-19 | 0.84 | HGI48_RS13220 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.84 | HGI48_RS20465 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 71 |
| Dickeya dianthicola ME23 | 0.84 | DZA65_RS13690 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.85 | DZA65_RS21510 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 75 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS13155 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.82 | DDA3937_RS00910 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 74 |
| Serratia liquefaciens MT49 | 0.83 | IAI46_09755 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.69 | IAI46_24580 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 86 |
| Klebsiella michiganensis M5al | 0.83 | BWI76_RS11050 | | 23S rRNA pseudouridine(955/2504/2580) synthase | 0.67 | BWI76_RS00745 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.83 | GFF3366 | | Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) | 0.65 | GFF2312 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.82 | EX28DRAFT_1844 | | pseudouridine synthase, RluA family | 0.67 | EX28DRAFT_4403 | | 1,4-dihydroxy-2-naphthoate prenyltransferase (EC 2.5.1.74) | low | > 76 |
| Escherichia coli ECRC99 | 0.82 | KEDOAH_24140 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | KEDOAH_14415 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | — | — |
| Escherichia coli ECRC102 | 0.82 | NIAGMN_24215 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | NIAGMN_11500 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | — | — |
| Escherichia coli ECRC101 | 0.82 | MCAODC_22975 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | MCAODC_04245 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.82 | OHPLBJKB_02580 | | Ribosomal large subunit pseudouridine synthase C | 0.68 | OHPLBJKB_04121 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | low | > 73 |
| Escherichia coli ECRC62 | 0.82 | BNILDI_19305 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | BNILDI_05640 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 75 |
| Escherichia coli ECOR38 | 0.82 | HEPCGN_23865 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | HEPCGN_12390 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 87 |
| Escherichia coli ECRC100 | 0.82 | OKFHMN_03615 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | OKFHMN_13745 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 80 |
| Escherichia fergusonii Becca | 0.82 | EFB2_02889 | | Ribosomal large subunit pseudouridine synthase C | 0.68 | EFB2_04688 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | 0.54 | 59 |
| Escherichia coli ECRC98 | 0.82 | JDDGAC_07275 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | JDDGAC_17370 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 86 |
| Escherichia coli ECOR27 | 0.82 | NOLOHH_21145 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | NOLOHH_05890 | menA | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | 0.65 | 63 |
| Escherichia coli BL21 | 0.82 | ECD_01082 | | 23S rRNA pseudouridine(955,2504,2580) synthase | 0.68 | ECD_03815 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | low | > 61 |
| Escherichia coli BW25113 | 0.82 | b1086 | rluC | 23S rRNA pseudouridylate synthase (NCBI) | 0.68 | b3930 | menA | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.81 | ECOLIN_RS06280 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.68 | ECOLIN_RS22630 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 55 |
| Enterobacter sp. TBS_079 | 0.80 | MPMX20_01766 | | Ribosomal large subunit pseudouridine synthase C | 0.65 | MPMX20_04539 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS14855 | rluC | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.54 | LU632_RS19680 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 74 |
| Shewanella loihica PV-4 | 0.64 | Shew_1594 | | RluA family pseudouridine synthase (RefSeq) | 0.24 | Shew_2558 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (RefSeq) | 0.56 | 48 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_2566 | | ribosomal large subunit pseudouridine synthase C (RefSeq) | 0.24 | Shewana3_1686 | | 1,4-dihydroxy-2-naphtoate prenyltransferase (RefSeq) | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.63 | CSW01_10130 | | 23S rRNA pseudouridine(955/2504/2580) synthase RluC | 0.44 | CSW01_13505 | | 1,4-dihydroxy-2-naphthoate polyprenyltransferase | low | > 62 |
| Shewanella amazonensis SB2B | 0.62 | Sama_1988 | | pseudouridylate synthase (RefSeq) | 0.26 | Sama_1366 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (RefSeq) | low | > 62 |
| Dechlorosoma suillum PS | 0.46 | Dsui_2437 | | pseudouridine synthase, RluA family | 0.21 | Dsui_3320 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase | low | > 51 |
| Rhodospirillum rubrum S1H | 0.24 | Rru_A2659 | | Pseudouridine synthase, RluD (NCBI) | 0.18 | Rru_A3388 | | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | — | — |
Not shown: 53 genomes with orthologs for HER17_RS08615 only; 8 genomes with orthologs for HER17_RS00845 only