Conservation of cofitness between HER17_RS13490 and HER17_RS00665 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13490 NAD-dependent malic enzyme 1.0 HER17_RS00665 envelope stress response regulator transcription factor CpxR 0.65 14
Dickeya dianthicola 67-19 0.89 HGI48_RS08645 NAD-dependent malic enzyme 0.88 HGI48_RS20595 envelope stress response regulator transcription factor CpxR 0.72 14
Dickeya dianthicola ME23 0.89 DZA65_RS08935 NAD-dependent malic enzyme 0.88 DZA65_RS21610 envelope stress response regulator transcription factor CpxR low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS08480 NAD-dependent malic enzyme 0.89 DDA3937_RS00780 envelope stress response regulator transcription factor CpxR — —
Serratia liquefaciens MT49 0.88 IAI46_07935 NAD-dependent malic enzyme 0.84 IAI46_24660 envelope stress response regulator transcription factor CpxR low > 86
Rahnella sp. WP5 0.86 EX31_RS18665 NAD-dependent malic enzyme 0.90 EX31_RS14320 envelope stress response regulator transcription factor CpxR low > 89
Pantoea sp. MT58 0.82 IAI47_06755 NAD-dependent malic enzyme 0.92 IAI47_00760 envelope stress response regulator transcription factor CpxR low > 76
Erwinia tracheiphila SCR3 0.78 LU632_RS08550 NAD-dependent malic enzyme 0.92 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02238 NAD-dependent malic enzyme 0.85 OHPLBJKB_04138 Transcriptional regulatory protein CpxR low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.86 GFF2280 Copper-sensing two-component system response regulator CpxR low > 78
Escherichia coli BL21 0.77 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 0.85 ECD_03798 response regulator in two-component regulatory system with CpxA — —
Escherichia coli ECOR27 0.77 NOLOHH_19035 maeA malate dehydrogenase 0.85 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli ECRC62 0.77 BNILDI_17520 maeA malate dehydrogenase 0.85 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli BW25113 0.77 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 0.85 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) low > 76
Escherichia fergusonii Becca 0.77 EFB2_02512 NAD-dependent malic enzyme 0.85 EFB2_04705 Transcriptional regulatory protein CpxR low > 86
Enterobacter sp. TBS_079 0.77 MPMX20_02369 NAD-dependent malic enzyme 0.86 MPMX20_04556 Transcriptional regulatory protein CpxR low > 85
Escherichia coli ECOR38 0.77 HEPCGN_26435 maeA malate dehydrogenase 0.85 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR 0.54 25
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1103 Malic enzyme 0.86 EX28DRAFT_4387 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS13830 NAD-dependent malic enzyme 0.85 BWI76_RS00720 DNA-binding response regulator low > 92
Escherichia coli Nissle 1917 0.77 ECOLIN_RS08525 malate dehydrogenase 0.85 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC99 0.77 KEDOAH_27080 maeA malate dehydrogenase 0.85 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC100 0.77 OKFHMN_01360 maeA malate dehydrogenase 0.85 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR low > 80
Escherichia coli ECRC101 0.77 MCAODC_16580 maeA malate dehydrogenase 0.85 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR low > 87
Escherichia coli ECRC102 0.77 NIAGMN_25490 maeA malate dehydrogenase 0.85 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC98 0.77 JDDGAC_03850 maeA malate dehydrogenase 0.85 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR low > 86
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06015 NAD-dependent malic enzyme 0.56 CSW01_13590 DNA-binding response regulator low > 62
Shewanella sp. ANA-3 0.69 Shewana3_0750 malate dehydrogenase (RefSeq) 0.50 Shewana3_0253 two component transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.50 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.69 Sama_2621 malate dehydrogenase (RefSeq) 0.52 Sama_3432 response regulator receiver protein (RefSeq) low > 62
Shewanella loihica PV-4 0.68 Shew_2962 malate dehydrogenase (RefSeq) 0.54 Shew_3570 two component transcriptional regulator (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.64 MIT1002_00455 NAD-dependent malic enzyme 0.47 MIT1002_00477 Response regulator ArlR low > 70

Not shown: 7 genomes with orthologs for HER17_RS13490 only; 8 genomes with orthologs for HER17_RS00665 only