Conservation of cofitness between HEPCGN_04840 and HEPCGN_08680 in Escherichia coli ECOR38

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 HEPCGN_08680 ilvI acetolactate synthase 3 large subunit 0.54 12
Escherichia coli ECOR27 0.99 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 NOLOHH_03045 ilvI acetolactate synthase 3 large subunit — —
Escherichia coli ECRC62 0.99 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 BNILDI_08565 ilvI acetolactate synthase 3 large subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 0.99 OHPLBJKB_03581 Acetolactate synthase isozyme 3 large subunit low > 73
Escherichia coli BL21 0.98 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 0.99 ECD_00079 acetolactate synthase 3 large subunit — —
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 0.99 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 ECOLIN_RS00415 acetolactate synthase 3 large subunit — —
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 0.99 EFB2_03969 Acetolactate synthase isozyme 3 large subunit low > 86
Escherichia coli ECRC101 0.98 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 MCAODC_01215 ilvI acetolactate synthase 3 large subunit low > 87
Escherichia coli ECRC102 0.98 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 NIAGMN_08550 ilvI acetolactate synthase 3 large subunit — —
Escherichia coli ECRC99 0.98 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 KEDOAH_17455 ilvI acetolactate synthase 3 large subunit — —
Escherichia coli ECRC100 0.98 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 OKFHMN_10700 ilvI acetolactate synthase 3 large subunit — —
Escherichia coli ECRC98 0.98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 JDDGAC_14295 ilvI acetolactate synthase 3 large subunit 0.57 49
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.90 GFF161 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.93 EX28DRAFT_3673 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.93 MPMX20_00771 Acetolactate synthase isozyme 3 large subunit low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.93 BWI76_RS04695 acetolactate synthase 3 large subunit low > 92
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.88 IAI47_15990 acetolactate synthase 3 large subunit low > 76
Serratia liquefaciens MT49 0.69 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 IAI46_03375 acetolactate synthase 3 large subunit low > 86
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 EX31_RS03665 acetolactate synthase 3 large subunit low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 HER17_RS03095 acetolactate synthase 3 large subunit low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 DDA3937_RS18105 acetolactate synthase 3 large subunit low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 DZA65_RS19185 acetolactate synthase 3 large subunit low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.86 HGI48_RS18040 acetolactate synthase 3 large subunit low > 71
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.75 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.77 Shewana3_2269 acetolactate synthase 3 catalytic subunit (RefSeq) low > 73
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.75 Shew_1776 acetolactate synthase 3 catalytic subunit (RefSeq) low > 60
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.77 SO2279 ilvI acetolactate synthase III, large subunit (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.48 Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.78 Sama_2018 acetolactate synthase 3 catalytic subunit (RefSeq) low > 62

Not shown: 8 genomes with orthologs for HEPCGN_04840 only; 56 genomes with orthologs for HEPCGN_08680 only