Conservation of cofitness between GFF3861 and GFF83 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3861 Uridine kinase (EC 2.7.1.48) [C1] 1.0 GFF83 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.60 9
Enterobacter asburiae PDN3 0.97 EX28DRAFT_0488 uridine kinase (EC 2.7.1.48) 0.85 EX28DRAFT_3738 penicillin-binding protein 1B low > 76
Enterobacter sp. TBS_079 0.97 MPMX20_03048 Uridine kinase 0.86 MPMX20_00835 Penicillin-binding protein 1B low > 85
Escherichia coli BL21 0.96 ECD_01972 uridine/cytidine kinase 0.86 ECD_00148 fused glycosyl transferase and transpeptidase low > 61
Escherichia coli Nissle 1917 0.96 ECOLIN_RS12160 uridine kinase 0.85 ECOLIN_RS00835 bifunctional glycosyl transferase/transpeptidase low > 55
Escherichia coli ECRC101 0.96 MCAODC_20670 udk uridine kinase 0.85 MCAODC_00840 mrcB bifunctional glycosyl transferase/transpeptidase low > 87
Escherichia coli ECOR27 0.96 NOLOHH_15610 udk uridine kinase 0.85 NOLOHH_02670 mrcB bifunctional glycosyl transferase/transpeptidase low > 75
Escherichia coli ECRC102 0.96 NIAGMN_22215 udk uridine kinase 0.85 NIAGMN_08175 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC62 0.96 BNILDI_14520 udk uridine kinase 0.85 BNILDI_09000 mrcB bifunctional glycosyl transferase/transpeptidase low > 75
Escherichia fergusonii Becca 0.96 EFB2_01788 Uridine kinase 0.85 EFB2_03895 Penicillin-binding protein 1B low > 86
Escherichia coli ECRC100 0.96 OKFHMN_24270 udk uridine kinase 0.85 OKFHMN_10325 mrcB bifunctional glycosyl transferase/transpeptidase low > 80
Escherichia coli ECOR38 0.96 HEPCGN_02970 udk uridine kinase 0.85 HEPCGN_08275 mrcB bifunctional glycosyl transferase/transpeptidase low > 87
Escherichia coli BW25113 0.96 b2066 udk uridine/cytidine kinase (VIMSS) 0.85 b0149 mrcB penicillin-binding protein 1b (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_01640 Uridine kinase 0.85 OHPLBJKB_03513 Penicillin-binding protein 1B low > 73
Escherichia coli ECRC99 0.96 KEDOAH_03880 udk uridine kinase 0.85 KEDOAH_17830 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC98 0.96 JDDGAC_28380 udk uridine kinase 0.85 JDDGAC_13920 mrcB bifunctional glycosyl transferase/transpeptidase low > 86
Klebsiella michiganensis M5al 0.93 BWI76_RS19125 uridine kinase 0.82 BWI76_RS05120 bifunctional glycosyl transferase/transpeptidase — —
Serratia liquefaciens MT49 0.92 IAI46_07975 uridine kinase 0.69 IAI46_21190 bifunctional glycosyl transferase/transpeptidase low > 86
Dickeya dadantii 3937 0.91 DDA3937_RS06690 uridine kinase 0.69 DDA3937_RS15915 bifunctional glycosyl transferase/transpeptidase low > 74
Rahnella sp. WP5 0.91 EX31_RS11545 uridine kinase 0.66 EX31_RS03230 bifunctional glycosyl transferase/transpeptidase low > 89
Dickeya dianthicola 67-19 0.91 HGI48_RS06705 uridine kinase 0.67 HGI48_RS16030 bifunctional glycosyl transferase/transpeptidase low > 71
Dickeya dianthicola ME23 0.91 DZA65_RS07060 uridine kinase 0.68 DZA65_RS17115 bifunctional glycosyl transferase/transpeptidase low > 75
Pantoea sp. MT58 0.90 IAI47_06905 uridine kinase 0.73 IAI47_15615 bifunctional glycosyl transferase/transpeptidase low > 76
Pectobacterium carotovorum WPP14 0.90 HER17_RS14650 uridine kinase 0.69 HER17_RS05600 bifunctional glycosyl transferase/transpeptidase low > 75
Erwinia tracheiphila SCR3 0.89 LU632_RS08740 udk uridine kinase 0.73 LU632_RS20060 mrcB bifunctional glycosyl transferase/transpeptidase 0.42 46
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_05280 uridine kinase 0.41 CSW01_03175 penicillin-binding protein 1B low > 62
Shewanella amazonensis SB2B 0.74 Sama_2047 uridine kinase (RefSeq) 0.36 Sama_2971 peptidoglycan glycosyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.73 SO2617 udk uridine kinase (NCBI ptt file) 0.35 SO0633 mrcB penicillin-binding protein 1B (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.73 Shewana3_1762 uridine kinase (RefSeq) 0.35 Shewana3_0623 penicillin-binding protein 1B (RefSeq) — —
Shewanella loihica PV-4 0.73 Shew_1575 uridine kinase (RefSeq) 0.34 Shew_3123 penicillin-binding protein 1B (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.51 MIT1002_03498 Uridine kinase 0.32 MIT1002_00409 Murein polymerase low > 70

Not shown: 10 genomes with orthologs for GFF3861 only; 23 genomes with orthologs for GFF83 only