Conservation of cofitness between PS417_17550 and PS417_04080 in Pseudomonas simiae WCS417

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 1.0 PS417_04080 peptide ABC transporter substrate-binding protein 0.27 16
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.96 PFLU_RS04120 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.96 PFLU_RS04120 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_26640 2-oxoisovalerate dehydrogenase 0.91 AO353_05375 peptide ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_22985 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.90 AO356_07240 peptide ABC transporter substrate-binding protein low > 104
Pseudomonas sp. RS175 0.94 PFR28_02446 2-oxoisovalerate dehydrogenase subunit beta 0.88 PFR28_00131 Periplasmic dipeptide transport protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.91 Pf6N2E2_3307 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) low > 103
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4479 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.91 Pf1N1B4_1120 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) 0.21 58
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_3541 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.91 PfGW456L13_5051 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) low > 87
Pseudomonas putida KT2440 0.89 PP_4402 branched-chain alpha-keto acid dehydrogenase complex, beta subunit 0.83 PP_0885 dipeptide ABC transporter - periplasmic binding protein low > 96
Shewanella sp. ANA-3 0.43 Shewana3_2130 transketolase, central region (RefSeq) 0.40 Shewana3_2650 acetate kinase (RefSeq)
Shewanella oneidensis MR-1 0.43 SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) 0.39 SO1805 sapA peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS16525 alpha-ketoacid dehydrogenase subunit beta 0.15 RPSI07_RS10835 ABC transporter substrate-binding protein low > 81
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS00945 alpha-ketoacid dehydrogenase subunit beta 0.15 RALBFv3_RS06405 ABC transporter substrate-binding protein low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS14255 alpha-ketoacid dehydrogenase subunit beta 0.15 UW163_RS07220 ABC transporter substrate-binding protein
Ralstonia solanacearum GMI1000 0.37 RS_RS09075 alpha-ketoacid dehydrogenase subunit beta 0.14 RS_RS14350 ABC transporter substrate-binding protein low > 80
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS33050 2-oxoisovalerate dehydrogenase 0.15 RR42_RS18210 ABC transporter substrate-binding protein low > 128

Not shown: 18 genomes with orthologs for PS417_17550 only; 9 genomes with orthologs for PS417_04080 only