Conservation of cofitness between GFF1807 and GFF630 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1807 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 1.0 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) 0.85 13
Escherichia coli ECRC62 0.96 BNILDI_16940 fumB class I fumarate hydratase 0.91 BNILDI_02615 aroB 3-dehydroquinate synthase low > 75
Escherichia coli BL21 0.96 ECD_01581 fumarate hydratase (fumarase A), aerobic Class I 0.91 ECD_03241 3-dehydroquinate synthase low > 61
Escherichia coli BW25113 0.96 b1612 fumA fumarate hydratase (fumarase A), aerobic Class I (NCBI) 0.91 b3389 aroB 3-dehydroquinate synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.96 EFB2_02380 Fumarate hydratase class I, aerobic 0.91 EFB2_00439 3-dehydroquinate synthase low > 86
Escherichia coli Nissle 1917 0.96 ECOLIN_RS09000 class I fumarate hydratase 0.90 ECOLIN_RS19360 3-dehydroquinate synthase low > 55
Escherichia coli ECOR27 0.96 NOLOHH_18150 fumB class I fumarate hydratase 0.91 NOLOHH_08905 aroB 3-dehydroquinate synthase low > 75
Escherichia coli ECOR38 0.96 HEPCGN_06020 fumB class I fumarate hydratase 0.91 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_02114 Fumarate hydratase class I, aerobic 0.91 OHPLBJKB_00314 3-dehydroquinate synthase 0.30 52
Escherichia coli ECRC98 0.96 JDDGAC_02235 fumB class I fumarate hydratase 0.91 JDDGAC_20745 aroB 3-dehydroquinate synthase low > 86
Escherichia coli ECRC102 0.96 NIAGMN_00430 fumB class I fumarate hydratase 0.91 NIAGMN_14885 aroB 3-dehydroquinate synthase
Escherichia coli ECRC101 0.96 MCAODC_17765 fumB class I fumarate hydratase 0.91 MCAODC_07645 aroB 3-dehydroquinate synthase low > 87
Escherichia coli ECRC100 0.96 OKFHMN_27645 fumB class I fumarate hydratase 0.91 OKFHMN_17115 aroB 3-dehydroquinate synthase low > 80
Escherichia coli ECRC99 0.96 KEDOAH_00460 fumB class I fumarate hydratase 0.91 KEDOAH_11025 aroB 3-dehydroquinate synthase
Enterobacter sp. TBS_079 0.94 MPMX20_02021 Fumarate hydratase class I, aerobic 0.87 MPMX20_04278 3-dehydroquinate synthase low > 85
Enterobacter asburiae PDN3 0.94 EX28DRAFT_1609 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 0.87 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) low > 76
Serratia liquefaciens MT49 0.93 IAI46_21370 fumarate hydratase 0.81 IAI46_23700 3-dehydroquinate synthase 0.52 19
Klebsiella michiganensis M5al 0.91 BWI76_RS16275 fumarate hydratase FumA 0.85 BWI76_RS26085 3-dehydroquinate synthase low > 92
Rahnella sp. WP5 0.91 EX31_RS01160 fumarate hydratase 0.84 EX31_RS04720 3-dehydroquinate synthase
Erwinia tracheiphila SCR3 0.90 LU632_RS01205 class I fumarate hydratase FumA 0.81 LU632_RS22865 aroB 3-dehydroquinate synthase low > 74
Pantoea sp. MT58 0.90 IAI47_20435 fumarate hydratase 0.83 IAI47_01895 3-dehydroquinate synthase
Dickeya dadantii 3937 0.88 DDA3937_RS04540 fumarate hydratase 0.80 DDA3937_RS19545 3-dehydroquinate synthase
Pectobacterium carotovorum WPP14 0.88 HER17_RS17120 fumarate hydratase 0.80 HER17_RS01780 3-dehydroquinate synthase low > 75
Dickeya dianthicola 67-19 0.88 HGI48_RS04500 fumarate hydratase 0.80 HGI48_RS19675 3-dehydroquinate synthase
Dickeya dianthicola ME23 0.87 DZA65_RS04420 fumarate hydratase 0.80 DZA65_RS20760 3-dehydroquinate synthase
Magnetospirillum magneticum AMB-1 0.67 AMB_RS06760 fumarate hydratase 0.39 AMB_RS19865 3-dehydroquinate synthase
Azospirillum sp. SherDot2 0.66 MPMX19_03166 Fumarate hydratase class I, aerobic 0.39 MPMX19_02639 3-dehydroquinate synthase
Azospirillum brasilense Sp245 0.65 AZOBR_RS10315 fumarate hydratase 0.40 AZOBR_RS03220 3-dehydroquinate synthase
Pseudomonas fluorescens SBW25 0.19 PFLU_RS24270 fumarate hydratase 0.56 PFLU_RS02030 3-dehydroquinate synthase
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS24270 fumarate hydratase 0.56 PFLU_RS02030 3-dehydroquinate synthase
Pseudomonas simiae WCS417 0.19 PS417_22635 fumarate hydratase 0.56 PS417_01985 3-dehydroquinate synthase
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_683 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.56 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4)
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_1808 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.56 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4)
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_03795 fumarate hydratase 0.55 AO353_12505 3-dehydroquinate synthase
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_4031 fumarase 0.54 Psyr_0409 3-dehydroquinate synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_4031 fumarase 0.54 Psyr_0409 3-dehydroquinate synthase

Not shown: 1 genomes with orthologs for GFF1807 only; 55 genomes with orthologs for GFF630 only