Conservation of cofitness between GFF247 and GFF6286 in Variovorax sp. SCN45

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF247 ATP-dependent helicase HrpA 1.0 GFF6286 Probable signal peptide protein 0.54 19
Variovorax sp. OAS795 0.94 ABID97_RS16615 ATP-dependent RNA helicase HrpA 0.85 ABID97_RS04790 YceI family protein low > 91
Acidovorax sp. GW101-3H11 0.82 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.47 Ac3H11_3546 Protein yceI precursor low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.43 GFF95 Probable signal peptide protein low > 90
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS17315 ATP-dependent helicase 0.36 HSERO_RS03410 polyisoprenoid-binding protein low > 78
Castellaniella sp019104865 MT123 0.52 ABCV34_RS02420 ATP-dependent RNA helicase HrpA 0.38 ABCV34_RS08175 YceI family protein low > 48
Serratia liquefaciens MT49 0.43 IAI46_13330 ATP-dependent RNA helicase HrpA 0.14 IAI46_09690 YceI family protein low > 86
Dickeya dianthicola ME23 0.42 DZA65_RS12800 ATP-dependent RNA helicase HrpA 0.17 DZA65_RS13730 YceI family protein low > 75
Pectobacterium carotovorum WPP14 0.42 HER17_RS09660 ATP-dependent RNA helicase HrpA 0.16 HER17_RS08575 YceI family protein low > 75
Dickeya dadantii 3937 0.42 DDA3937_RS12270 ATP-dependent RNA helicase HrpA 0.17 DDA3937_RS13190 YceI family protein low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02301 hypothetical protein 0.17 OHPLBJKB_02609 Protein YceI low > 73
Escherichia coli BW25113 0.41 b1413 hrpA ATP-dependent helicase (RefSeq) 0.17 b1056 yceI hypothetical protein (NCBI) low > 76
Dickeya dianthicola 67-19 0.41 HGI48_RS12360 ATP-dependent RNA helicase HrpA 0.17 HGI48_RS13255 YceI family protein low > 71
Escherichia coli ECOR27 0.41 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA 0.17 NOLOHH_21290 yceI YceI family protein low > 75
Escherichia coli Nissle 1917 0.41 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA 0.17 ECOLIN_RS06130 YceI family protein — —
Rahnella sp. WP5 0.41 EX31_RS06495 ATP-dependent RNA helicase HrpA 0.15 EX31_RS24340 YceI family protein low > 89
Escherichia fergusonii Becca 0.41 EFB2_02565 hypothetical protein 0.17 EFB2_02918 Protein YceI low > 86
Escherichia coli ECRC62 0.41 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA 0.17 BNILDI_19450 yceI YceI family protein low > 75
Escherichia coli ECRC98 0.41 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA 0.17 JDDGAC_07420 yceI YceI family protein 0.62 50
Escherichia coli ECRC99 0.41 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA 0.17 KEDOAH_23995 yceI YceI family protein — —
Escherichia coli ECRC102 0.41 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA 0.17 NIAGMN_24070 yceI YceI family protein — —
Escherichia coli BL21 0.41 ECD_01368 putative ATP-dependent helicase 0.17 ECD_01052 periplasmic high pH-inducible lipid-binding protein — —
Escherichia coli ECRC101 0.41 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA 0.17 MCAODC_23120 yceI YceI family protein low > 87
Escherichia coli ECRC100 0.41 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA 0.17 OKFHMN_03760 yceI YceI family protein — —
Erwinia tracheiphila SCR3 0.41 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA 0.18 LU632_RS10305 YceI family protein low > 74
Marinobacter adhaerens HP15 0.41 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type 0.17 HP15_2523 hypothetical protein low > 73
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2694 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.16 Pf6N2E2_4634 Protein yceI precursor low > 103
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3388 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.16 Pf1N1B4_2381 Protein yceI precursor 0.30 54
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS19720 ATP-dependent RNA helicase HrpA 0.29 ABZR86_RS20420 YceI family protein low > 74
Acinetobacter radioresistens SK82 0.34 MPMX26_02008 hypothetical protein 0.22 MPMX26_01773 Protein YceI low > 36
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1779 ATP-dependent helicase HrpA 0.19 B158DRAFT_0439 Uncharacterized conserved protein low > 40
Pseudomonas stutzeri RCH2 0.23 Psest_1339 ATP-dependent helicase HrpA 0.18 Psest_0308 Uncharacterized conserved protein — —

Not shown: 37 genomes with orthologs for GFF247 only; 4 genomes with orthologs for GFF6286 only