Conservation of cofitness between GFF3093 and GFF61 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3093 Mannonate dehydratase (EC 4.2.1.8) 1.0 GFF61 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), subgroup 1 0.39 7
Klebsiella michiganensis M5al 0.94 BWI76_RS05650 mannonate dehydratase 0.85 BWI76_RS05175 dGTPase low > 92
Escherichia coli BL21 0.93 ECD_04191 mannonate hydrolase 0.89 ECD_00159 deoxyguanosine triphosphate triphosphohydrolase low > 61
Escherichia coli Nissle 1917 0.93 ECOLIN_RS24835 mannonate dehydratase 0.88 ECOLIN_RS00890 dGTPase
Escherichia fergusonii Becca 0.93 EFB2_04122 Mannonate dehydratase 0.88 EFB2_03884 Deoxyguanosinetriphosphate triphosphohydrolase low > 86
Escherichia coli ECRC62 0.93 BNILDI_07705 uxuA mannonate dehydratase 0.89 BNILDI_09065 dgt dGTPase low > 75
Escherichia coli BW25113 0.93 b4322 uxuA mannonate dehydratase (NCBI) 0.89 b0160 dgt deoxyguanosinetriphosphate triphosphohydrolase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_03745 Mannonate dehydratase 0.89 OHPLBJKB_03502 Deoxyguanosinetriphosphate triphosphohydrolase low > 73
Escherichia coli ECRC101 0.93 MCAODC_02080 uxuA mannonate dehydratase 0.89 MCAODC_00775 dgt dGTPase low > 87
Escherichia coli ECRC100 0.93 OKFHMN_11565 uxuA mannonate dehydratase 0.89 OKFHMN_10260 dgt dGTPase low > 80
Escherichia coli ECRC102 0.93 NIAGMN_09415 uxuA mannonate dehydratase 0.89 NIAGMN_08110 dgt dGTPase
Escherichia coli ECOR38 0.93 HEPCGN_09575 uxuA mannonate dehydratase 0.89 HEPCGN_08210 dgt dGTPase low > 87
Escherichia coli ECOR27 0.93 NOLOHH_03890 uxuA mannonate dehydratase 0.89 NOLOHH_02605 dgt dGTPase low > 75
Escherichia coli ECRC98 0.93 JDDGAC_15160 uxuA mannonate dehydratase 0.89 JDDGAC_13855 dgt dGTPase low > 86
Escherichia coli ECRC99 0.93 KEDOAH_16580 uxuA mannonate dehydratase 0.89 KEDOAH_17895 dgt dGTPase
Enterobacter asburiae PDN3 0.78 EX28DRAFT_0390 mannonate dehydratase 0.84 EX28DRAFT_3749 deoxyguanosinetriphosphate triphosphohydrolase, putative low > 76
Dickeya dianthicola ME23 0.77 DZA65_RS21985 mannonate dehydratase 0.57 DZA65_RS17090 dGTPase low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS00370 mannonate dehydratase 0.57 DDA3937_RS15865 dGTPase low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS21000 mannonate dehydratase 0.57 HGI48_RS16005 dGTPase low > 71
Enterobacter sp. TBS_079 0.77 MPMX20_03137 Mannonate dehydratase 0.84 MPMX20_00846 Deoxyguanosinetriphosphate triphosphohydrolase low > 85
Serratia liquefaciens MT49 0.76 IAI46_17280 mannonate dehydratase 0.66 IAI46_03580 dGTPase low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS16140 mannonate dehydratase 0.58 HER17_RS05655 dGTPase low > 75
Rahnella sp. WP5 0.73 EX31_RS06665 mannonate dehydratase 0.61 EX31_RS03175 dGTPase low > 89
Pantoea sp. MT58 0.71 IAI47_01440 mannonate dehydratase 0.56 IAI47_15565 dGTPase low > 76
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_28530 mannonate dehydratase 0.14 AO356_03040 deoxyguanosinetriphosphate triphosphohydrolase low > 104
Bacteroides thetaiotaomicron VPI-5482 0.65 BT1432 mannonate dehydratase (NCBI ptt file) 0.18 BT3460 dGTP triphosphohydrolase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.65 BACOVA_00858 mannonate dehydratase 0.18 BACOVA_01844 putative dGTPase low > 94
Parabacteroides merdae CL09T00C40 0.64 HMPREF1078_RS13635 mannonate dehydratase 0.17 HMPREF1078_RS05185 dNTP triphosphohydrolase low > 61
Phocaeicola vulgatus CL09T03C04 0.64 HMPREF1058_RS11755 mannonate dehydratase 0.16 HMPREF1058_RS12450 deoxyguanosinetriphosphate triphosphohydrolase low > 67
Phocaeicola dorei CL03T12C01 0.64 ABI39_RS05150 mannonate dehydratase 0.17 ABI39_RS04295 deoxyguanosinetriphosphate triphosphohydrolase low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.63 ABZR88_RS00290 mannonate dehydratase 0.18 ABZR88_RS16775 deoxyguanosinetriphosphate triphosphohydrolase low > 71
Bacteroides stercoris CC31F 0.63 HMPREF1181_RS02210 mannonate dehydratase 0.17 HMPREF1181_RS02855 deoxyguanosinetriphosphate triphosphohydrolase low > 56
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_3100 mannonate dehydratase 0.18 Echvi_0968 deoxyguanosinetriphosphate triphosphohydrolase, putative low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.55 CA264_13955 mannonate dehydratase 0.17 CA264_16685 deoxyguanosinetriphosphate triphosphohydrolase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.54 CA265_RS07225 mannonate dehydratase 0.15 CA265_RS16980 deoxyguanosinetriphosphate triphosphohydrolase low > 88
Agrobacterium fabrum C58 0.53 Atu3257 mannonate dehydratase 0.08 Atu1712 deoxyguanosinetriphosphate triphosphohydrolase low > 89
Rhizobium sp. OAE497 0.49 ABIE40_RS22400 mannonate dehydratase 0.09 ABIE40_RS08430 deoxyguanosinetriphosphate triphosphohydrolase low > 107
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_3477 Mannonate dehydratase (EC 4.2.1.8) 0.14 PfGW456L13_2263 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) low > 87

Not shown: 6 genomes with orthologs for GFF3093 only; 35 genomes with orthologs for GFF61 only