Conservation of cofitness between GFF3303 and GFF4647 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3303 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 1.0 GFF4647 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) 0.45 10
Klebsiella michiganensis M5al 0.95 BWI76_RS10800 sodium:proline symporter 0.90 BWI76_RS08500 cytochrome d ubiquinol oxidase subunit 2 low > 92
Escherichia coli BW25113 0.93 b1015 putP proline:sodium symporter (NCBI) 0.94 b0734 cydB cytochrome d terminal oxidase, subunit II (NCBI)
Escherichia coli ECRC62 0.93 BNILDI_19660 putP sodium/proline symporter PutP 0.94 BNILDI_21270 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli BL21 0.93 ECD_01018 proline:sodium symporter 0.94 ECD_00693 cytochrome d terminal oxidase, subunit II
Escherichia coli ECOR27 0.93 NOLOHH_21495 putP sodium/proline symporter PutP 0.94 NOLOHH_23275 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli ECRC98 0.93 JDDGAC_08205 putP sodium/proline symporter PutP 0.94 JDDGAC_10495 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli Nissle 1917 0.93 ECOLIN_RS05300 sodium/proline symporter PutP 0.94 ECOLIN_RS03905 cytochrome d ubiquinol oxidase subunit II
Escherichia coli ECRC99 0.93 KEDOAH_23150 putP sodium/proline symporter PutP 0.94 KEDOAH_21125 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli ECRC101 0.93 MCAODC_23980 putP sodium/proline symporter PutP 0.94 MCAODC_26060 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli ECOR38 0.93 HEPCGN_23540 putP sodium/proline symporter PutP 0.94 HEPCGN_01430 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia fergusonii Becca 0.93 EFB2_03065 Sodium/proline symporter 0.94 EFB2_03373 Cytochrome bd-I ubiquinol oxidase subunit 2
Escherichia coli ECRC102 0.93 NIAGMN_23740 putP sodium/proline symporter PutP 0.94 NIAGMN_04890 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli ECRC100 0.93 OKFHMN_04595 putP sodium/proline symporter PutP 0.94 OKFHMN_06840 cydB cytochrome d ubiquinol oxidase subunit II
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02651 Sodium/proline symporter 0.94 OHPLBJKB_02980 Cytochrome bd-I ubiquinol oxidase subunit 2
Enterobacter asburiae PDN3 0.92 EX28DRAFT_1910 sodium/proline symporter 0.90 EX28DRAFT_2258 cytochrome d oxidase, subunit II (cydB) low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_01703 Sodium/proline symporter 0.94 MPMX20_01362 Cytochrome bd-I ubiquinol oxidase subunit 2 low > 85
Pantoea sp. MT58 0.84 IAI47_08205 sodium/proline symporter PutP 0.84 IAI47_13720 cytochrome d ubiquinol oxidase subunit II low > 76
Serratia liquefaciens MT49 0.81 IAI46_15740 sodium/proline symporter PutP 0.80 IAI46_06300 cytochrome d ubiquinol oxidase subunit II low > 86
Rahnella sp. WP5 0.80 EX31_RS09415 sodium/proline symporter PutP 0.78 EX31_RS23465 cytochrome d ubiquinol oxidase subunit II low > 89
Dickeya dianthicola ME23 0.80 DZA65_RS21305 sodium/proline symporter PutP 0.83 DZA65_RS06875 cytochrome d ubiquinol oxidase subunit II
Dickeya dianthicola 67-19 0.80 HGI48_RS20260 sodium/proline symporter PutP 0.83 HGI48_RS06525 cytochrome d ubiquinol oxidase subunit II
Pectobacterium carotovorum WPP14 0.80 HER17_RS01105 sodium/proline symporter PutP 0.85 HER17_RS14900 cytochrome d ubiquinol oxidase subunit II low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS20120 sodium/proline symporter PutP 0.83 DDA3937_RS06485 cytochrome d ubiquinol oxidase subunit II
Erwinia tracheiphila SCR3 0.79 LU632_RS13735 putP sodium/proline symporter PutP 0.82 LU632_RS16060 cydB cytochrome d ubiquinol oxidase subunit II
Pseudomonas stutzeri RCH2 0.73 Psest_3075 sodium/proline symporter 0.55 Psest_3024 cytochrome d oxidase, subunit II (cydB) low > 67
Acinetobacter radioresistens SK82 0.65 MPMX26_01468 Sodium/proline symporter 0.54 MPMX26_01624 Cytochrome bd-I ubiquinol oxidase subunit 2
Shewanella loihica PV-4 0.51 Shew_2435 sodium/proline symporter (RefSeq) 0.70 Shew_1303 cytochrome d ubiquinol oxidase, subunit II (RefSeq)
Shewanella amazonensis SB2B 0.51 Sama_2177 sodium/proline symporter (RefSeq) 0.67 Sama_2348 cytochrome bd-I oxidase subunit II (RefSeq) low > 62
Shewanella sp. ANA-3 0.49 Shewana3_1451 sodium/proline symporter (RefSeq) 0.70 Shewana3_1242 cytochrome d ubiquinol oxidase, subunit II (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.47 MIT1002_01275 Proline permease 0.59 MIT1002_03848 Cytochrome d ubiquinol oxidase subunit 2 low > 70
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_19440 sodium/proline symporter PutP 0.66 CSW01_09230 cytochrome d ubiquinol oxidase subunit II

Not shown: 20 genomes with orthologs for GFF3303 only; 27 genomes with orthologs for GFF4647 only