Conservation of cofitness between PS417_23580 and PS417_22190 in Pseudomonas simiae WCS417

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23580 peptidylprolyl isomerase 1.0 PS417_22190 diguanylate cyclase 0.47 11
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25395 FKBP-type peptidyl-prolyl cis-trans isomerase 0.95 PFLU_RS23815 GGDEF and EAL domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25395 FKBP-type peptidyl-prolyl cis-trans isomerase 0.95 PFLU_RS23815 GGDEF and EAL domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2793 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) 0.90 Pf1N1B4_714 GGDEF domain/EAL domain protein low > 87
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1464 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) 0.89 PfGW456L13_1777 GGDEF domain/EAL domain protein low > 87
Pseudomonas sp. RS175 0.88 PFR28_03776 FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase 0.88 PFR28_00605 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_14080 peptidylprolyl isomerase 0.90 AO353_03970 diguanylate cyclase low > 101
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15780 peptidylprolyl isomerase 0.89 AO356_05010 diguanylate cyclase low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_5096 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) 0.89 Pf6N2E2_2852 GGDEF domain/EAL domain protein low > 103
Pseudomonas putida KT2440 0.85 PP_0684 FKBP-type peptidyl-prolyl cis-trans isomerase 0.86 PP_0914 GGDEF domain protein low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4255 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type 0.83 Psyr_4060 diguanylate cyclase/phosphodiesterase low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4255 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type 0.83 Psyr_4060 diguanylate cyclase/phosphodiesterase low > 86
Pseudomonas sp. S08-1 0.79 OH686_16275 FKBP-type peptidyl-prolyl cis-trans isomerase FklB 0.83 OH686_07220 c-di-GMP phosphodiesterase low > 80
Pseudomonas stutzeri RCH2 0.79 Psest_3390 FKBP-type peptidyl-prolyl cis-trans isomerases 1 0.72 Psest_1163 diguanylate cyclase (GGDEF) domain low > 67
Shewanella amazonensis SB2B 0.54 Sama_2506 peptidyl-prolyl cis-trans isomerase FklB (RefSeq) 0.28 Sama_0965 GGDEF domain-containing protein (RefSeq) low > 62
Shewanella loihica PV-4 0.54 Shew_2841 peptidylprolyl isomerase, FKBP-type (RefSeq) 0.27 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.53 SO1139 fklB peptidyl-prolyl cis-trans isomerase FklB (NCBI ptt file) 0.26 SO1208 GGDEF domain protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.49 IAI46_01730 FKBP-type peptidyl-prolyl cis-trans isomerase 0.20 IAI46_00545 biofilm formation regulator HmsP low > 86

Not shown: 16 genomes with orthologs for PS417_23580 only; 2 genomes with orthologs for PS417_22190 only