Conservation of cofitness between GFF3254 and GFF4103 in Hydrogenophaga sp. GW460-11-11-14-LB1

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3254 Ribonuclease PH (EC 2.7.7.56) 1.0 GFF4103 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) 0.56 9
Variovorax sp. SCN45 0.81 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.69 GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) low > 127
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS03645 ribonuclease PH 0.08 QEN71_RS11060 glycine betaine ABC transporter substrate-binding protein low > 153
Castellaniella sp019104865 MT123 0.67 ABCV34_RS03515 ribonuclease PH 0.09 ABCV34_RS06255 glycine betaine ABC transporter substrate-binding protein low > 48
Dickeya dianthicola ME23 0.65 DZA65_RS00730 ribonuclease PH 0.63 DZA65_RS17885 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS00675 ribonuclease PH 0.63 HGI48_RS16810 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 71
Dickeya dadantii 3937 0.64 DDA3937_RS20540 ribonuclease PH 0.65 DDA3937_RS16730 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 74
Enterobacter sp. TBS_079 0.63 MPMX20_00092 Ribonuclease PH 0.61 MPMX20_03560 Glycine betaine/proline betaine-binding periplasmic protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.63 GFF1589 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) low > 78
Enterobacter asburiae PDN3 0.63 EX28DRAFT_3893 ribonuclease PH 0.61 EX28DRAFT_2765 ABC-type proline/glycine betaine transport systems, periplasmic components low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0213 RNAse PH 0.10 Psyr_3778 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0213 RNAse PH 0.10 Psyr_3778 Substrate-binding region of ABC-type glycine betaine transport system low > 86
Escherichia coli ECRC62 0.63 BNILDI_04045 rph ribonuclease PH 0.61 BNILDI_11210 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia coli ECRC101 0.63 OKFHMN_15590 rph ribonuclease PH 0.61 OKFHMN_20810 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia coli ECOR27 0.63 NOLOHH_07470 rph ribonuclease PH 0.61 NOLOHH_12650 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 57
Escherichia coli ECRC98 0.63 JDDGAC_19215 rph ribonuclease PH 0.61 JDDGAC_24475 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia coli ECRC102 0.63 NIAGMN_13350 rph ribonuclease PH 0.61 NIAGMN_18580 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia coli ECRC99 0.63 KEDOAH_12555 rph ribonuclease PH 0.61 KEDOAH_07325 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS20755 ribonuclease PH 0.61 ECOLIN_RS14940 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 52
Klebsiella michiganensis M5al 0.63 BWI76_RS27390 ribonuclease PH 0.64 BWI76_RS22075 glycine betaine ABC transporter substrate-binding protein low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00059 Ribonuclease PH 0.61 OHPLBJKB_01053 Glycine betaine/proline betaine-binding periplasmic protein low > 73
Escherichia coli BL21 0.63 ECD_03500 ribonuclease PH 0.61 ECD_02535 glycine betaine/proline ABC transporter periplasmic binding protein; cold shock protein low > 60
Escherichia coli ECOR38 0.63 HEPCGN_14410 rph ribonuclease PH 0.61 HEPCGN_20010 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 85
Escherichia fergusonii Becca 0.63 EFB2_00170 Ribonuclease PH 0.61 EFB2_01248 Glycine betaine/proline betaine-binding periplasmic protein low > 86
Escherichia coli ECRC101 0.63 MCAODC_06100 rph ribonuclease PH 0.61 MCAODC_11335 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX — —
Pantoea sp. MT58 0.63 IAI47_00595 ribonuclease PH 0.61 IAI47_04515 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 76
Pseudomonas simiae WCS417 0.62 PS417_27810 ribonuclease PH 0.11 PS417_11935 ABC transporter substrate-binding protein 0.23 40
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS29490 ribonuclease PH 0.11 PFLU_RS12665 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS29490 ribonuclease PH 0.11 PFLU_RS12665 ABC transporter substrate-binding protein low > 109
Erwinia tracheiphila SCR3 0.62 LU632_RS22020 rph ribonuclease PH 0.64 LU632_RS16830 proX glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 74
Pectobacterium carotovorum WPP14 0.62 HER17_RS20855 ribonuclease PH 0.65 HER17_RS04495 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 75
Rahnella sp. WP5 0.61 EX31_RS14505 ribonuclease PH 0.61 EX31_RS13620 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 89
Serratia liquefaciens MT49 0.61 IAI46_24850 ribonuclease PH 0.68 IAI46_19965 glycine betaine/L-proline ABC transporter substrate-binding protein ProX low > 86
Escherichia coli BW25113 0.61 b3643 rph ribonuclease PH (NCBI) 0.61 b2679 proX glycine betaine transporter subunit (NCBI) low > 76
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.11 SMc00672 histidine-binding periplasmic signal peptide protein low > 103
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.28 MPMX19_06816 Glycine betaine-binding periplasmic protein OusX low > 112
Agrobacterium fabrum C58 0.59 Atu0327 ribonuclease PH 0.29 Atu5220 glycine betaine transporter periplasmic subunit — —
Rhodospirillum rubrum S1H 0.59 Rru_A3641 Ribonuclease PH (NCBI) 0.67 Rru_A2477 Substrate-binding region of ABC-type glycine betaine transport system (NCBI) low > 58

Not shown: 51 genomes with orthologs for GFF3254 only; 0 genomes with orthologs for GFF4103 only