Conservation of cofitness between PS417_23050 and PS417_20580 in Pseudomonas simiae WCS417

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23050 trehalose PTS system, EII-BC components TreB (from data) 1.0 PS417_20580 isocitrate dehydrogenase 0.18 15
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS24715 PTS system trehalose-specific EIIBC component 0.96 PFLU_RS22290 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS24715 PTS system trehalose-specific EIIBC component 0.96 PFLU_RS22290 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 109
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_15980 trehalose PTS system, EII-BC components TreB (from data) 0.89 AO353_18220 isocitrate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_836 PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) 0.89 Pf1N1B4_3387 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) low > 87
Rahnella sp. WP5 0.39 EX31_RS08385 PTS trehalose transporter subunit IIBC 0.44 EX31_RS11750 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 89
Klebsiella michiganensis M5al 0.38 BWI76_RS02965 PTS trehalose transporter subunit IIBC 0.42 BWI76_RS01670 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03795 PTS system trehalose-specific EIIBC component 0.42 OHPLBJKB_04034 Isocitrate dehydrogenase kinase/phosphatase low > 73
Escherichia coli ECRC62 0.38 BNILDI_07350 treB PTS trehalose transporter subunit IIBC 0.42 BNILDI_06125 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli BL21 0.38 ECD_04108 trehalose-specific PTS enzyme: IIB and IIC component 0.42 ECD_03888 isocitrate dehydrogenase kinase/phosphatase low > 60
Enterobacter asburiae PDN3 0.38 EX28DRAFT_3439 PTS system, trehalose-specific IIBC component 0.42 EX28DRAFT_4328 Isocitrate dehydrogenase kinase/phosphatase low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_00538 PTS system trehalose-specific EIIBC component 0.42 MPMX20_00233 Isocitrate dehydrogenase kinase/phosphatase low > 85
Pectobacterium carotovorum WPP14 0.37 HER17_RS07200 PTS trehalose transporter subunit IIBC 0.44 HER17_RS02300 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 75
Escherichia coli ECRC99 0.37 KEDOAH_16260 treB PTS trehalose transporter subunit IIBC 0.42 KEDOAH_14905 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECRC98 0.37 JDDGAC_15535 treB PTS trehalose transporter subunit IIBC 0.42 JDDGAC_16880 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECRC101 0.37 MCAODC_02400 treB PTS trehalose transporter subunit IIBC 0.42 MCAODC_03755 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECOR38 0.37 HEPCGN_10090 treB PTS trehalose transporter subunit IIBC 0.42 HEPCGN_11895 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase low > 85
Escherichia coli ECOR27 0.37 NOLOHH_04160 treB PTS trehalose transporter subunit IIBC 0.42 NOLOHH_05395 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase low > 57
Escherichia coli ECRC101 0.37 OKFHMN_11895 treB PTS trehalose transporter subunit IIBC 0.42 OKFHMN_13255 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli ECRC102 0.37 NIAGMN_09745 treB PTS trehalose transporter subunit IIBC 0.42 NIAGMN_11005 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS24600 PTS trehalose transporter subunit IIBC 0.42 ECOLIN_RS23150 bifunctional isocitrate dehydrogenase kinase/phosphatase — —
Escherichia fergusonii Becca 0.37 EFB2_04293 PTS system trehalose-specific EIIBC component 0.42 EFB2_04594 Isocitrate dehydrogenase kinase/phosphatase low > 86
Escherichia coli BW25113 0.36 b4240 treB fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) 0.42 b4016 aceK bifunctional isocitrate dehydrogenase kinase/phosphatase protein (NCBI) low > 76
Serratia liquefaciens MT49 0.36 IAI46_02155 PTS trehalose transporter subunit IIBC 0.45 IAI46_23185 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 86
Dickeya dianthicola 67-19 0.33 HGI48_RS01770 PTS sucrose transporter subunit IIBC 0.43 HGI48_RS19140 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 71
Pantoea sp. MT58 0.33 IAI47_21860 PTS sucrose transporter subunit IIBC 0.40 IAI47_18000 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 76
Dickeya dianthicola ME23 0.33 DZA65_RS01845 PTS sucrose transporter subunit IIBC 0.44 DZA65_RS20260 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 75
Dickeya dadantii 3937 0.33 DDA3937_RS01845 PTS sucrose transporter subunit IIBC 0.43 DDA3937_RS19050 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 74
Ralstonia solanacearum GMI1000 0.32 RS_RS23350 PTS sugar transporter 0.37 RS_RS01365 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 80
Ralstonia solanacearum PSI07 0.31 RPSI07_RS04935 PTS sugar transporter 0.38 RPSI07_RS22790 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 81
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS18655 PTS sugar transporter 0.38 RALBFv3_RS10525 bifunctional isocitrate dehydrogenase kinase/phosphatase low > 76
Ralstonia solanacearum UW163 0.30 UW163_RS20475 PTS sugar transporter 0.38 UW163_RS03055 bifunctional isocitrate dehydrogenase kinase/phosphatase — —

Not shown: 2 genomes with orthologs for PS417_23050 only; 23 genomes with orthologs for PS417_20580 only