Conservation of cofitness between PS417_16525 and PS417_19965 in Pseudomonas simiae WCS417

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_16525 isocitrate dehydrogenase 1.0 PS417_19965 histidine kinase 0.35 3
Pseudomonas fluorescens SBW25 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.98 PFLU_RS21935 sensor histidine kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS18565 NADP-dependent isocitrate dehydrogenase 0.98 PFLU_RS21935 sensor histidine kinase low > 109
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_289 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.89 Pf6N2E2_5760 Sensory box histidine kinase/response regulator low > 103
Pseudomonas sp. RS175 0.98 PFR28_02616 Isocitrate dehydrogenase [NADP] 0.89 PFR28_03189 Sensor histidine kinase RcsC low > 88
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_27690 isocitrate dehydrogenase 0.90 AO353_02555 histidine kinase low > 101
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_22135 isocitrate dehydrogenase 0.89 AO356_19225 histidine kinase 0.23 57
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2643 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 0.90 PfGW456L13_4223 Sensory box histidine kinase/response regulator low > 87
Pseudomonas putida KT2440 0.93 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.85 PP_1695 putative Sodium-solute symporter/sensory box histidine kinase/response regulator low > 96
Pseudomonas sp. S08-1 0.93 OH686_00220 isocitrate dehydrogenase, NADP-dependent 0.78 OH686_19595 Two-component system sensor histidine kinase — —
Pseudomonas stutzeri RCH2 0.90 Psest_2024 isocitrate dehydrogenase, NADP-dependent, prokaryotic type 0.78 Psest_1527 Na+/proline symporter low > 67
Acinetobacter radioresistens SK82 0.78 MPMX26_01012 Isocitrate dehydrogenase [NADP] 0.35 MPMX26_02900 Sensor histidine kinase RcsC low > 36
Shewanella sp. ANA-3 0.22 Shewana3_2890 isocitrate dehydrogenase (RefSeq) 0.43 Shewana3_2522 multi-sensor hybrid histidine kinase (RefSeq) — —
Lysobacter sp. OAE881 0.22 ABIE51_RS14200 isocitrate dehydrogenase 0.40 ABIE51_RS01675 PAS domain-containing hybrid sensor histidine kinase/response regulator — —
Shewanella oneidensis MR-1 0.22 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.44 SO2742 sensor histidine kinase/response regulator (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.21 Sama_2423 isocitrate dehydrogenase (RefSeq) 0.43 Sama_2078 sensor histidine kinase/response regulator (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.38 Xcc-8004.5181.1 Sensor histidine kinase — —

Not shown: 53 genomes with orthologs for PS417_16525 only; 17 genomes with orthologs for PS417_19965 only