Conservation of cofitness between PS417_19605 and PS417_18705 in Pseudomonas simiae WCS417

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_19605 hypothetical protein 1.0 PS417_18705 succinate dehydrogenase 0.27 11
Pseudomonas fluorescens SBW25 0.99 PFLU_RS21575 pyrimidine/purine nucleoside phosphorylase 0.95 PFLU_RS20675 aldehyde dehydrogenase family protein
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS21575 pyrimidine/purine nucleoside phosphorylase 0.95 PFLU_RS20675 aldehyde dehydrogenase family protein low > 109
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2282 FIG074102: hypothetical protein 0.78 PfGW456L13_3880 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_227 FIG074102: hypothetical protein 0.77 Pf1N1B4_5616 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_1831 Protein of unknown function DUF1255 0.74 Psyr_2394 succinate semialdehyde dehydrogenase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_1831 Protein of unknown function DUF1255 0.74 Psyr_2394 succinate semialdehyde dehydrogenase
Pseudomonas putida KT2440 0.84 PP_4248 conserved protein of unknown function, UPF0345 family 0.72 PP_3151 NAD+-dependent succinate semialdehyde dehydrogenase
Alteromonas macleodii MIT1002 0.62 MIT1002_01116 hypothetical protein 0.42 MIT1002_03989 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 70
Klebsiella michiganensis M5al 0.58 BWI76_RS06200 hypothetical protein 0.69 BWI76_RS15205 succinate-semialdehyde dehydrogenase low > 92
Escherichia fergusonii Becca 0.55 EFB2_03665 Pyrimidine/purine nucleoside phosphorylase 0.64 EFB2_02435 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 86
Escherichia coli Nissle 1917 0.55 ECOLIN_RS02375 pyrimidine/purine nucleoside phosphorylase 0.64 ECOLIN_RS08710 succinate-semialdehyde dehydrogenase
Escherichia coli ECRC62 0.55 BNILDI_22925 ppnP pyrimidine/purine nucleoside phosphorylase 0.65 BNILDI_17240 sad succinate-semialdehyde dehydrogenase low > 75
Escherichia coli ECRC100 0.55 OKFHMN_08585 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 OKFHMN_01110 sad succinate-semialdehyde dehydrogenase low > 80
Escherichia coli ECRC98 0.55 JDDGAC_12240 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 JDDGAC_03620 sad succinate-semialdehyde dehydrogenase low > 86
Escherichia coli ECRC102 0.55 NIAGMN_06640 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 NIAGMN_25255 sad succinate-semialdehyde dehydrogenase
Escherichia coli BL21 0.55 ECD_00338 UPF0345 family protein 0.64 ECD_01482 succinate semialdehyde dehydrogenase, NAD(P)+-dependent low > 61
Escherichia coli BW25113 0.55 b0391 yaiE hypothetical protein (NCBI) 0.64 b1525 b1525 putative aldehyde dehydrogenase (VIMSS) 0.17 16
Escherichia coli ECOR27 0.55 NOLOHH_01510 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 NOLOHH_18760 sad succinate-semialdehyde dehydrogenase low > 75
Escherichia coli ECRC99 0.55 KEDOAH_19380 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 KEDOAH_27320 sad succinate-semialdehyde dehydrogenase
Escherichia coli ECOR38 0.55 HEPCGN_07225 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 HEPCGN_26650 sad succinate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC101 0.55 MCAODC_27810 ppnP pyrimidine/purine nucleoside phosphorylase 0.64 MCAODC_16815 sad succinate-semialdehyde dehydrogenase low > 87
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2580 Uncharacterized protein conserved in bacteria 0.68 EX28DRAFT_1198 NAD-dependent aldehyde dehydrogenases low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03283 Pyrimidine/purine nucleoside phosphorylase 0.64 OHPLBJKB_02194 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 73
Enterobacter sp. TBS_079 0.55 MPMX20_00981 Pyrimidine/purine nucleoside phosphorylase 0.67 MPMX20_02269 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad low > 85
Pantoea sp. MT58 0.54 IAI47_14920 pyrimidine/purine nucleoside phosphorylase 0.59 IAI47_21330 aldehyde dehydrogenase family protein low > 76
Erwinia tracheiphila SCR3 0.53 LU632_RS18960 ppnP pyrimidine/purine nucleoside phosphorylase 0.40 LU632_RS10125 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4289 Cytoplasmic protein YaiE 0.64 GFF2511 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 78
Rahnella sp. WP5 0.51 EX31_RS21985 pyrimidine/purine nucleoside phosphorylase 0.69 EX31_RS00180 aldehyde dehydrogenase family protein low > 89
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS33290 pyrimidine/purine nucleoside phosphorylase 0.34 QEN71_RS38495 NAD-dependent succinate-semialdehyde dehydrogenase low > 153
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS07110 pyrimidine/purine nucleoside phosphorylase 0.43 ABZR88_RS05210 NAD-dependent succinate-semialdehyde dehydrogenase low > 71
Paraburkholderia graminis OAS925 0.37 ABIE53_004878 uncharacterized protein YaiE (UPF0345 family) 0.58 ABIE53_001753 succinate-semialdehyde dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_05998 hypothetical protein 0.57 H281DRAFT_00057 succinate semialdehyde dehydrogenase low > 103
Variovorax sp. OAS795 0.32 ABID97_RS21665 pyrimidine/purine nucleoside phosphorylase 0.44 ABID97_RS19050 NAD-dependent succinate-semialdehyde dehydrogenase
Variovorax sp. SCN45 0.31 GFF3095 FIG074102: hypothetical protein 0.44 GFF713 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.79)
Acinetobacter radioresistens SK82 0.27 MPMX26_00240 Pyrimidine/purine nucleoside phosphorylase 0.37 MPMX26_00106 Succinate semialdehyde dehydrogenase [NAD(P)+] Sad

Not shown: 28 genomes with orthologs for PS417_19605 only; 9 genomes with orthologs for PS417_18705 only