Conservation of cofitness between GFF3495 and GFF3178 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3495 Succinylarginine dihydrolase (EC 3.5.3.23) 1.0 GFF3178 G:T/U mismatch-specific uracil/thymine DNA-glycosylase 0.37 7
Escherichia coli BW25113 0.87 b1745 astB succinylarginine dihydrolase (NCBI) 0.84 b3068 ygjF G/U mismatch-specific DNA glycosylase (NCBI) low > 76
Escherichia coli BL21 0.87 ECD_01714 succinylarginine dihydrolase 0.84 ECD_02938 G/U mismatch-specific DNA glycosylase; xanthine DNA glycosylase
Escherichia coli ECRC99 0.86 KEDOAH_01190 astB N-succinylarginine dihydrolase 0.84 KEDOAH_09495 mug G/U mismatch-specific DNA glycosylase
Escherichia coli ECRC101 0.86 MCAODC_18490 astB N-succinylarginine dihydrolase 0.84 MCAODC_09165 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia coli ECRC102 0.86 NIAGMN_01145 astB N-succinylarginine dihydrolase 0.84 NIAGMN_16415 mug G/U mismatch-specific DNA glycosylase
Escherichia coli ECRC98 0.86 JDDGAC_01495 astB N-succinylarginine dihydrolase 0.84 JDDGAC_22285 mug G/U mismatch-specific DNA glycosylase low > 86
Escherichia coli ECRC100 0.86 OKFHMN_26920 astB N-succinylarginine dihydrolase 0.84 OKFHMN_18650 mug G/U mismatch-specific DNA glycosylase low > 80
Escherichia coli ECOR27 0.86 NOLOHH_17435 astB N-succinylarginine dihydrolase 0.84 NOLOHH_10440 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia coli ECOR38 0.86 HEPCGN_05285 astB N-succinylarginine dihydrolase 0.84 HEPCGN_17500 mug G/U mismatch-specific DNA glycosylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_01987 N-succinylarginine dihydrolase 0.84 OHPLBJKB_00634 G/U mismatch-specific DNA glycosylase low > 73
Escherichia coli ECRC62 0.86 BNILDI_16220 astB N-succinylarginine dihydrolase 0.84 BNILDI_01075 mug G/U mismatch-specific DNA glycosylase low > 75
Escherichia fergusonii Becca 0.85 EFB2_02248 N-succinylarginine dihydrolase 0.84 EFB2_00743 G/U mismatch-specific DNA glycosylase low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS09730 N-succinylarginine dihydrolase 0.84 ECOLIN_RS17710 G/U mismatch-specific DNA glycosylase low > 55
Enterobacter sp. TBS_079 0.75 MPMX20_01868 N-succinylarginine dihydrolase 0.81 MPMX20_03910 G/U mismatch-specific DNA glycosylase low > 85
Enterobacter asburiae PDN3 0.75 EX28DRAFT_1749 succinylarginine dihydrolase (EC 3.5.3.23) 0.80 EX28DRAFT_3103 G/U mismatch-specific uracil-DNA glycosylase (EC 3.2.2.-) low > 76
Klebsiella michiganensis M5al 0.73 BWI76_RS11685 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.76 BWI76_RS24565 mismatch-specific DNA-glycosylase low > 92
Pantoea sp. MT58 0.71 IAI47_11080 N-succinylarginine dihydrolase 0.62 IAI47_03045 G/U mismatch-specific DNA glycosylase low > 76
Serratia liquefaciens MT49 0.67 IAI46_15320 N-succinylarginine dihydrolase 0.61 IAI46_22135 G/U mismatch-specific DNA glycosylase low > 86
Rahnella sp. WP5 0.60 EX31_RS17395 N-succinylarginine dihydrolase 0.60 EX31_RS08215 G/U mismatch-specific DNA glycosylase low > 89
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_03005 succinylarginine dihydrolase 0.45 AO353_28115 DNA glycosylase low > 101
Paraburkholderia graminis OAS925 0.54 ABIE53_001773 succinylarginine dihydrolase 0.41 ABIE53_002582 TDG/mug DNA glycosylase family protein
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_06482 succinylarginine dihydrolase 0.35 H281DRAFT_00353 G/U mismatch-specific uracil-DNA glycosylase
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS23355 N-succinylarginine dihydrolase 0.43 QEN71_RS38265 G/U mismatch-specific DNA glycosylase
Pseudomonas fluorescens SBW25 0.53 PFLU_RS23295 N-succinylarginine dihydrolase 0.44 PFLU_RS11680 G/U mismatch-specific DNA glycosylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS23295 N-succinylarginine dihydrolase 0.44 PFLU_RS11680 G/U mismatch-specific DNA glycosylase low > 109
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS07715 N-succinylarginine dihydrolase 0.46 BPHYT_RS10515 DNA glycosylase

Not shown: 22 genomes with orthologs for GFF3495 only; 10 genomes with orthologs for GFF3178 only